Job Description P37047 Confidence 98.82% Date Thu Jan 5 11:54:38 GMT 2012 Rank 2 Aligned Residues 119 % Identity 16% Template c2gx5B_ PDB info PDB header:transcription Chain: B: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody; PDBTitle: n-terminal gaf domain of transcriptional pleiotropic repressor cody Resolution 1.74 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60										.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		L	D	T	K	M	A	Q	D	I	V	A	R	T	M	R	I	I	D	T	N	I	N	V	M	D	A	R	G	R	I	I	G	S	G	D	R	E	R	I	G	.	.	.	.	.	.	.	.	.	.	.	E	L	H	E	G	A	L	L	V	L	S	Q	G	R	V	.	.	.	.	.	.	.	.	.	V	D	I	D	D
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	P	V	N	F	K	E	M	A	E	T	L	R	D	V	I	D	S	N	I	F	V	V	S	R	R	G	K	L	L	G	Y	S	I	N	Q	Q	I	E	N	D	R	M	K	K	M	L	E	D	R	Q	F	P	E	E	Y	T	K	N	L	F	N	V	P	E	T	S	S	N	L	D	I	N	S	E	T	A	F	P
Template Known Secondary structure			S																T	S							T	T	S	B							S	S														T	B											T			S							T	T					S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	R	H	L	H	G	V	R	Q	G	I	N	L	P	L	R	L	E	G	E	I	V	G	V	I	G	L	T	G	E	P	E	N	L	R	K	Y	G	E	L	V	C	M	T	A	E	M	M	L	E	Q	S	R	L	M	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	N	R	D	L	F	Q	A	G	L	T	T	I	V	P	I	I	G	G	G	E	R	L	G	T	L	I	L	S	R	L	Q	D	Q	F	N	D	D	D	L	I	L	A	E	Y	G	A	T	V	V	G	M	E	I	L	R	E	K
Template Known Secondary structure		G	G	G	G	G	G	G	S	S	S										T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions