Job Description P37047 Confidence 31.69% Date Thu Jan 5 11:54:38 GMT 2012 Rank 201 Aligned Residues 88 % Identity 17% Template c2gj3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:nitrogen fixation regulatory protein; PDBTitle: crystal structure of the fad-containing pas domain of the2 protein nifl from azotobacter vinelandii. Resolution 1.04 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	T	K	M	A	Q	D	I	V	A	R	T	M	R	I	I	D	T	N	I	N	V	M	D	A	R	G	R	I	I	G	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	E	R	I	G	E	L	H	E	G	A	L	L	V	L	S	Q	G	R	V	V	D
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		L	L	P	E	I	F	R	Q	T	V	.	.	.	.	E	H	A	P	I	A	I	S	I	T	D	L	K	A	N	I	L	Y	A	N	R	A	F	R	T	I	T	G	Y	G	S	E	E	V	L	G	K	N	E	S	I	L	S	N	G	T	T	P	R	L	V	Y	Q	A	L	W	G	R	L	A	Q	K	K	P	W	S
Template Known Secondary structure												.	.	.	.				S	S							T	T		B																T	T	G	G	G	G		B	G	G	G	G			T	T	S														T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure													.	.											.
Query SS confidence													.	.											.
Query Sequence		I	D	D	A	V	A	R	H	L	H	G	.	.	V	R	Q	G	I	N	L	P	L	R	.	L	E	G	E	I	V	G	V	I	G	L	T	G	E
Query Conservation													.	.											.
Alig confidence													.	.											.
Template Conservation
Template Sequence		G	V	L	V	N	R	R	K	D	K	T	L	Y	L	A	E	L	T	V	A	P	V	L	N	E	A	G	E	T	I	Y	Y	L	G	M	H	R	D
Template Known Secondary structure									T	T	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions