Job Description P37047 Confidence 75.07% Date Thu Jan 5 11:54:38 GMT 2012 Rank 98 Aligned Residues 60 % Identity 12% Template c1or7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma-e factor; PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea Resolution 2.00 Å

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		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	G	D	W	Q	A	N	E	L	A	R	P	L	A	R	L	K	T	M	D	N	N	G	L	L	R	R	T	L	A	A	W	F	R	H	N	V	Q	P	L	A	T	S	K	A	L	F	I	H	R	N	T	L	E	Y	R	L	N	R	I	S	E	L	T
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		M	L	S	E	E	L	R	Q	I	V	F	R	T	I	E	S	L	P	E	D	L	R	.	.	.	.	.	M	A	I	T	L	R	E	L	D	G	L	S	Y	E	E	I	A	A	I	M	D	C	P	V	G	T	V	R	S	R	I	F	R	A	R	E	A	I
Template Known Secondary structure																		S						.	.	.	.	.								T	T											T	T	S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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