Return to main results Retrieve Phyre Job Id

Job DescriptionP37047
Confidence96.44%DateThu Jan 5 11:54:38 GMT 2012
Rank15Aligned Residues46
% Identity13%Templatec1iz1B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:lysr-type regulatory protein; PDBTitle: crystal structure of cbnr, a lysr family transcriptional2 regulator
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   320.........330.........340.........350.........360......
Predicted Secondary structure 












Query SS confidence 














































Query Sequence  NGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDL
Query Conservation     

 

  

    
   

  
 





 


 

 

 
 

Alig confidence 













.































Template Conservation 

  
  
  
   .

 
 

  
 


 


  
  

  

  
Template Sequence  EFRQLKYFIAVAEA. GNMAAAAKRLHVSQPPITRQMQALEADLGVVL
Template Known Secondary structure 
.
STS
TS

Template Predicted Secondary structure 
.






Template SS confidence 














































   2.......10..... ....20.........30.........40.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions