Job Description P0A6I0 Confidence 99.80% Date Thu Jan 5 11:03:11 GMT 2012 Rank 21 Aligned Residues 160 % Identity 19% Template c3trfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:shikimate kinase; PDBTitle: structure of a shikimate kinase (arok) from coxiella burnetii Resolution 2.60 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	I	D	G	P	S	G	A	G	K	G	T	L	C	K	A	M	A	E	A	L	Q	W	H	L	L	D	S	G	A	I	Y	R	V	L	A	L	A	A	L	H	H	H	V	D	V	A	S	E	D	A	L	V	P	L	A	S	H	L	D	V	R	F	V	S	T	N	G	N	L	E	V	I	L	E	G	E	D	V
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	L	I	G	L	M	G	A	G	K	T	S	V	G	S	Q	L	A	K	L	T	K	R	I	L	Y	D	S	D	K	E	I	E	K	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	T	T	S	S											T	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		S	G	E	I	R	T	Q	E	V	A	N	A	A	S	Q	V	A	A	F	P	R	V	R	E	A	L	L	R	R	Q	R	A	F	R	E	L	P	G	L	I	A	D	.	.	.	.	.	.	G	R	D	M	G	T	V	V	F	P	D	A	P	V	K	I	F	L	D	A	S	S	E	E	R	A	H	R	R	M	L	Q
Query Conservation																																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	A	D	I	A	W	I	F	E	M	E	G	E	A	G	F	R	R	R	E	R	E	M	I	E	A	L	C	K	L	D	N	I	I	L	A	T	G	G	G	V	V	L	D	E	K	N	R	Q	Q	I	S	E	T	G	V	V	I	Y	L	T	A	S	I	D	T	Q	L	K	R	I	G	Q	K
Template Known Secondary structure		.	.	.	.	.	.	T	S																												S	S	S							G	G	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	E	K	G	F	S	V	N	F	E	R	L	L	A	E	I	K	E	R	D	D	R	D	R	N	R	A	V	A	P	L	V	P	A	A	D	A	L	V	L	D	S	T	T	L	S	I	E	Q	V	I	E	K	A	L	Q	Y	A	R
Query Conservation
Alig confidence																					.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		G	E	M	R	R	P	L	F	I	K	N	N	S	K	E	K	L	Q	Q	.	.	.	.	.	L	N	E	I	R	K	P	L	Y	Q	A	M	A	D	L	V	Y	P	T	D	D	L	N	P	R	Q	L	A	T	Q	I	L	V	D	I	K
Template Known Secondary structure		T	T		S	S															.	.	.	.	.														S						T	T
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions