Job Description P0A6I0 Confidence 98.12% Date Thu Jan 5 11:03:11 GMT 2012 Rank 149 Aligned Residues 148 % Identity 18% Template c3cf1C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx Resolution 4.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	P	V	I	T	I	D	G	P	S	G	A	G	K	G	T	L	C	K	A	M	A	E	A	L	Q	W	H	L	L	D	S	G	A	I	Y	R	V	L	A	L	A	A	L	H	H	H	V	D	V	A	S	E	D	A	L	V	P	L	A	S	H	L	D	V	R	F	V	S	T	N	G	N	L	E	V	I	L
Query Conservation
Alig confidence																																			.	.	.	.																																									.	.	.
Template Conservation																																			.	.	.	.																																									.	.	.
Template Sequence		T	P	S	K	G	V	L	F	Y	G	P	P	G	C	G	K	T	L	L	A	K	A	I	A	N	E	C	Q	A	N	F	I	S	.	.	.	.	I	K	G	P	E	L	L	T	M	W	F	G	E	S	E	A	N	V	R	E	I	F	D	K	A	R	Q	A	A	P	C	V	L	F	F	D	E	L	D	S	.	.	.
Template Known Secondary structure					S								T	T	S													T	T						.	.	.	.											T	T	T		T							T	T	T	T	T	T	T		S						S	S	G	G	G	.	.	.
Template Predicted Secondary structure																																			.	.	.	.																																									.	.	.
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.					.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		E	G	E	D	V	S	G	E	I	R	T	Q	E	V	A	N	A	A	S	Q	V	A	A	F	P	R	V	R	E	A	L	L	R	R	Q	R	A	F	R	E	L	P	G	L	I	A	D	G	R	D	M	G	T	V	V	F	P	.	.	.	.	.	.	.	D	A	P	V	K	I	F	L	D	A	S	S	E	E	R	A
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	A	K	A	R	G	G	N	I	G	D	G	G	G	A	A	D	R	V	I	N	Q	I	L	T	E	M	D	G	M	S	T	K	K	N	V	F	I	I	G	A	T	N	R	P	D	I	I	D	P	A	I	L	R	P	G	R	L	D	Q	L	I	Y	I	P	L	P	D	E	K	S	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	G					T	T	T	T		S	S			S														S	S		T	T	S	S								S		G	G	G			G	G	G	T	S	T	T	T	S											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		156	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	R	M	L	Q	L	Q	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	I	L	K	A	N	L	R	K
Template Known Secondary structure									T	T	T
Template Predicted Secondary structure
Template SS confidence
		654	.	.	.	.	.	660	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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