Job Description P0A6I0 Confidence 99.75% Date Thu Jan 5 11:03:11 GMT 2012 Rank 42 Aligned Residues 194 % Identity 21% Template c3asyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridine kinase; PDBTitle: ligand-free structure of uridine kinase from thermus thermophilus hb8 Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	P	V	I	T	I	D	G	P	S	G	A	G	K	G	T	L	C	K	A	M	A	E	A	L	Q	W	H	L	L	D	S	G	A	I	Y	R	V	L	A	L	A	A	L	H	H	H	V	D	V	A	S	E	D	A	L	V	P	L	A	S	H	L	D	V	R	F	V	S	T	N	G	N	L	E	V	I	L	E
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	F	V	I	G	I	A	G	G	T	A	S	G	K	T	T	L	A	Q	A	L	A	R	T	L	G	E	R	V	A	L	L	P	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	Y	Y	K	D	L	G	H	L	P	L	E	E	R	L	R	V	N	Y	D	H	P	D	A	F
Template Known Secondary structure												T	T	S	S													G	G	G						G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G		B				T	T	S		T	T	S	S	S	S	S		T	T	S	G	G	G	B
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		G	E	D	V	S	G	E	I	R	T	Q	E	V	A	N	A	A	S	Q	V	A	A	F	P	R	V	R	E	A	L	L	R	R	Q	R	A	F	R	E	L	P	G	L	I	A	D	G	R	D	M	G	T	.	.	V	V	F	P	D	A	P	V	K	I	F	L	D	A	S	S	E	E	R	A	H	R	R	M	L	Q
Query Conservation																																																						.	.
Alig confidence																																																						.	.
Template Conservation
Template Sequence		D	L	A	L	Y	L	E	H	A	Q	A	L	L	R	G	L	P	V	E	M	P	V	Y	D	F	R	A	Y	T	R	S	P	R	R	T	P	V	R	P	A	P	V	V	I	L	E	G	I	L	V	L	Y	P	K	E	L	R	D	L	M	D	L	K	V	F	V	D	A	D	A	D	E	R	F	I	R	R	L	K	R
Template Known Secondary structure															T	T										T	T	T	T													S						S	T	T	T	T	S	S					T	T		S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		L	Q	E	K	G	F	S	V	N	F	E	R	L	L	A	E	I	K	E	R	D	D	R	D	R	N	R	A	V	A	P	L	V	P	A	A	D	A	L	V	L	D	S	T	T	L	S	.	.	I	E	Q	V	I	E	K	A	L
Query Conservation																																																	.	.
Alig confidence		.																																															.	.
Template Conservation		.
Template Sequence		.	D	V	L	E	R	G	R	S	L	E	G	V	V	A	Q	Y	L	E	Q	V	K	P	M	H	L	H	F	V	E	P	T	K	R	Y	A	D	V	I	V	P	R	G	G	Q	N	P	V	A	L	E	M	L	A	A	K	A	L
Template Known Secondary structure		.				T	S														T								T	T	G	G	G	G	G	G		S					S	T	T	S													T
Template Predicted Secondary structure		.
Template SS confidence
			146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions