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Job DescriptionP0A6I0
Confidence99.71%DateThu Jan 5 11:03:11 GMT 2012
Rank57Aligned Residues189
% Identity15%Templatec3akyA_
PDB info PDB header:adenylate kinaseChain: A: PDB Molecule:adenylate kinase; PDBTitle: stability, activity and structure of adenylate kinase2 mutants
Resolution2.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  APVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEG
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Template Sequence  SIRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGT. . . . . . . . . . . . . . QLGLEAKKIMDQGGLVSDDIMV
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TTSS

TT
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   4.....10.........20.........30.........40....... ..50.........60.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQ. . .
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Template Sequence  NMIKDELTNNPACKNGFILDGFPRTIPQAEKLDQMLKEQGT. . . . . . . . . . . . . . PLEKAIELKVDDELLVARITGRLIH
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GGGGS
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   70.........80.........90.........100.........110 .........120.........130.....
 
   162.......170.........180.........190.........200.........210.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . LQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKAL
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Template Sequence  PASGRSYHKIFNPPKEDMKDDVTGEALVQRSDDNADALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQ. PPATVWADFL
Template Known Secondary structure  TTT

TTTB

SSTTB
GGG

B
B

TT
STTTTT
TTS.
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   136...140.........150.........160.........170.........180.........190.........200.... .....210....
 
   218.220..
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Query Sequence  QYARQ
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Template Sequence  NKLGK
Template Known Secondary structure  T
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   215....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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