Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6I0
Confidence98.27%DateThu Jan 5 11:03:11 GMT 2012
Rank140Aligned Residues186
% Identity20%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  TAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVI
Query Conservation       

 
 
  





 
  

  

   

 
   
                                        
Alig confidence 

































.................................












Template Conservation        


 

 




 

  

         .................................             
Template Sequence  AKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MAGAEFVEVIGGL
Template Known Secondary structure 




S
TTSST

.................................TTTTSSSSTT
Template Predicted Secondary structure 













.................................





Template SS confidence 















































































   339340.........350.........360.........370.. .......380.....
 
   82.......90.........100.........110.........120.........130.........140 .........150....
Predicted Secondary structure 













.......




Query SS confidence 


























































. . . . . . .













Query Sequence  LEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPD. . . . . . . APVKIFLDASSEER
Query Conservation           
                                   
             ....... 
  
 
    
  
Alig confidence 


























































.......













Template Conservation      
             

  
                     
  
  

                  
    
    
Template Sequence  GAARVRSLFKEARARAPCIVYIDEIEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQE
Template Known Secondary structure  T
S


T

TT

S
GGGGGSGGGSTTS



S

Template Predicted Secondary structure 






































Template SS confidence 















































































   386...390.........400.........410.........420.........430.........440.........450.........460.....
 
   155....160..... ....170.........180.........190.........200.........210.........220...
Predicted Secondary structure 


.













Query SS confidence 










.

























































Query Sequence  AHRRMLQLQEK. GFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQK
Query Conservation    
   
    .      
                           
 


   
 


   
   
  
Alig confidence 










.































...






















Template Conservation 
  
    
               

  
 
 
  

  
   
... 
 
       
   
     
 
Template Sequence  RREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEA. . . ALHVHTLNFEYAVERVLAGTAKK
Template Known Secondary structure  TT

BTT
TT

...T


B



Template Predicted Secondary structure 
















...


Template SS confidence 





































































   485....490.........500.........510.........520........ .530.........540.........550.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions