Job Description P0A6I0 Confidence 99.61% Date Thu Jan 5 11:03:11 GMT 2012 Rank 79 Aligned Residues 192 % Identity 11% Template c2ccjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of s. aureus thymidylate kinase complexed2 with thymidine monophosphate Resolution 1.7 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		P	V	I	T	I	D	G	P	S	G	A	G	K	G	T	L	C	K	A	M	A	E	A	L	.	.	Q	W	H	L	L	D	S	G	A	I	Y	R	V	L	A	L	A	A	L	H	H	H	V	D	V	A	S	E	D	A	L	V	P	L	A	S	H	L	D	V	R	F	V	S	T	N	G	N	L	E	V	I	L	E
Query Conservation																										.	.
Alig confidence																										.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	I	T	F	E	G	P	E	G	S	G	K	T	T	V	I	N	E	V	Y	H	R	L	V	K	D	Y	D	V	I	M	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	E	P	G	G	V	P	T	G	E	E	I	R	K	I	V	L	E	G	N	D	M	D	I	R	T	E	A	M	L	F	A	A	S
Template Known Secondary structure										T	T	S														T	T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	T	T													T		S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.														.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	D	V	S	G	E	I	R	T	Q	E	V	A	N	A	A	S	Q	V	A	A	F	P	R	V	R	E	A	L	L	R	R	Q	R	A	F	R	E	L	P	G	L	I	A	D	G	R	D	M	G	T	V	V	F	P	D	A	P	V	K	I	F	L	D	A	S	S	E	E	R	A	H	R	R	M	L	Q	L	Q
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		R	R	E	H	L	V	L	K	V	I	P	A	L	K	E	G	K	V	V	L	C	D	R	Y	I	D	S	S	L	A	Y	Q	G	Y	.	.	A	R	G	I	G	V	E	E	V	R	A	L	N	E	F	A	I	N	G	L	Y	P	D	L	T	I	Y	L	N	V	S	A	E	V	G	R	E	R	I	I	K	N	S	N
Template Known Secondary structure									T							T	T							S									T	T	T	.	.	T	T	S	S														T	T				S																			T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	G	F	S	V	N	F	E	R	L	L	A	E	I	K	E	R	D	D	R	D	R	N	R	A	V	A	P	L	V	P	A	A	D	A	L	V	L	D	S	T	T	L	S	I	E	Q	V	I	E	K	A	L	Q	Y	A	R	Q	K	L	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	D	L	K	F	H	E	K	V	I	E	G	Y	Q	E	I	I	H	R	F	K	S	V	N	A	D	Q	.	P	L	E	N	V	V	E	D	T	Y	Q	T	I	I	K	Y	L	E
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																										T	T	S	.																		T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		151	.	.													.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions