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Job DescriptionP0A6I0
Confidence99.79%DateThu Jan 5 11:03:11 GMT 2012
Rank25Aligned Residues154
% Identity16%Templatec1zuiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:shikimate kinase; PDBTitle: structural basis for shikimate-binding specificity of helicobacter2 pylori shikimate kinase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  ITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDV
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Template Sequence  LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
TTS
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   4.....10.........20.........30........
 
   88.90.........100.........110.........120.........130...... ...140.........150.........160.....
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Query Sequence  SGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTV. . VFPDAPVKIFLDASSEERAHRRMLQLQEK
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Template Sequence  . . . RVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPHVISTGGGIVMHENLKGLGTTFYLKMDFETLIKRLNQR. EKR
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   3940.........50.........60.........70.........80.........90.........100.........110. ...
 
   166...170.........180.........190.........200.........210.........220
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Query Sequence  GFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYA
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Template Sequence  PLLNNLTQAKELFEKRQ. . . . . . . . . ALYEKNASFIIDARG. GLNNSLKQVLQFI
Template Known Secondary structure  GGGGS.........
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   117..120.........130... ......140........ .150.........160.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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