 |
| Job Description | P0A6I0 | | Confidence | 97.73% | Date | Thu Jan 5 11:03:11 GMT 2012 |
| Rank | 194 | Aligned Residues | 32 |
| % Identity | 31% | Template | c1xwiA_ |
| PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:skd1 protein; |
PDBTitle: crystal structure of vps4b
|
| Resolution | 2.80 Å |
|
| | |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . |
| Predicted Secondary structure | |
|
|
|  | | | | |  |
|
|
|
|
|
|  | | | | | | | | | | | |
|
| | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | I | A | P | V | I | T | I | D | G | P | S | G | A | G | K | G | T | L | C | K | A | M | A | E | A | L | Q | W | H | L | L |
| Query Conservation | |
| | | |
|
| |
| |
| | |
|
|
|
|
|
| |
| | |
|
| | |
|
| | | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | |
|
|
|
| |
|
|
|
|
|
|
|
| |
|
| |
|
|
| | | | | | | | |
| Template Sequence | |
T | P | W | R | G | I | L | L | F | G | P | P | G | T | G | K | S | Y | L | A | K | A | V | A | T | E | A | N | N | S | T | F |
| Template Known Secondary structure | |
|
|
| S | | | | | | S | S | S | S | S |
| | | | | | | | | | | | T | T | S |
| | |
| Template Predicted Secondary structure | |
|
|
|
| | | | | |
|
|
|
|
|
| | | | | | | | | | | | |
|
|
| | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
