Job Description P0A6I0 Confidence 94.37% Date Thu Jan 5 11:03:11 GMT 2012 Rank 494 Aligned Residues 157 % Identity 19% Template c1vyuB_ PDB info PDB header:ion transport Chain: B: PDB Molecule:calcium channel beta-3 subunit; PDBTitle: beta3 subunit of voltage-gated ca2+-channel Resolution 2.3 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	I	A	P	V	I	T	I	D	G	P	S	G	A	G	K	G	T	L	C	K	A	M	A	E	A	L	Q	W	H	L	L	D	S	G	A	I	Y	R	V	L	A	L	A	A	L	H	H	H	V	D	V	A	S	E	D	A	L	V	P	L	A	S	H	L	D	V	R	F	V	S	T	N	G	N	L	E	V	I
Query Conservation
Alig confidence											.								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	X	R	P	V	V	L	V	.	G	P	S	L	K	G	Y	.	E	V	T	D	X	X	Q	K	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	F	L	K	H	R	F	D	G	R	I	S
Template Known Secondary structure			S	S							.		S	S		T	T	S	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	S
Template Predicted Secondary structure											.								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200																																								.	.	.	.	.	.	.	.	.	210	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.																			.
Query SS confidence																																																			.	.	.	.																			.
Query Sequence		L	E	G	E	D	V	S	G	E	I	R	T	Q	E	V	A	N	A	A	S	Q	V	A	A	F	P	R	V	R	E	A	L	L	R	R	Q	R	A	F	R	E	L	P	G	L	I	A	D	G	.	.	.	.	R	D	M	G	T	V	V	F	P	D	A	P	V	K	I	F	L	D	.	A	S	S	E	E	R	A	H
Query Conservation																																																			.	.	.	.																			.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																							.	.	.	.																			.
Template Conservation																			.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	R	V	T	A	D	L	S	L	A	K	S	S	I	A	E	.	.	.	.	.	.	.	.	.	.	V	Q	S	E	I	E	R	I	F	E	L	A	K	S	L	Q	L	V	V	L	D	A	D	T	I	N	H	P	A	Q	L	A	K	T	S	L	A	P	I	I	V	F	V	K	V	S	S	P	K	V	L	Q	R
Template Known Secondary structure							S		G	G	G								.	.	.	.	.	.	.	.	.	.													T	T									T	T			S	T					T	S	T	T										S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230											.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	M	L	Q	L	Q	E	K	G	F	S	V	N	F	E	R	L	L	A	E	I	K	E	R	D	D	R	D	R	N	R	A	V	A	P	L	V	P	A	A	D	A	L	V	L	D	S	T	T	L	S	I	E	Q	V	I	E	K	A	L	Q	Y	A	R	Q
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		L	I	R	S	R	G	K	S	Q	X	K	H	L	T	V	Q	X	X	A	Y	D	K	L	V	Q	C	P	P	E	S	F	.	.	.	.	.	.	.	.	.	.	.	D	V	I	L	D	.	.	E	N	Q	L	D	D	A	C	E	H	L	A	E	Y	L	E	V
Template Known Secondary structure						T						T	T	T	T	T											S		G	G	G		.	.	.	.	.	.	.	.	.	.	.	S					.	.		S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.												.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions