 |
Job Description | P0A6I0 | Confidence | 97.71% | Date | Thu Jan 5 11:03:11 GMT 2012 |
Rank | 196 | Aligned Residues | 33 |
% Identity | 24% | Template | c1s3sA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter |
PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
|
Resolution | 2.90 Å |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | A | P | V | I | T | I | D | G | P | S | G | A | G | K | G | T | L | C | K | A | M | A | E | A | L | Q | W | H | L | L | D |
Query Conservation |   |
  |   |   |   |
|
|   |
|   |
|   |   |
|
|
|
|
|
|   |
|   |   |
|
|   |   |
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |
|
|   |
|   |
|
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | P | P | R | G | I | L | L | Y | G | P | P | G | T | G | K | T | L | I | A | R | A | V | A | N | E | T | G | A | F | F | F | L |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|