Job Description P0A6I0 Confidence 98.98% Date Thu Jan 5 11:03:11 GMT 2012 Rank 124 Aligned Residues 160 % Identity 15% Template c1qhiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (thymidine kinase); PDBTitle: herpes simplex virus type-i thymidine kinase complexed with2 a novel non-substrate inhibitor, 9-(4-hydroxybutyl)-n2-3 phenylguanine Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	A	I	A	P	V	I	T	I	D	G	P	S	G	A	G	K	G	T	L	C	K	A	M	A	E	A	L	Q	W	.	.	.	.	.	.	.	H	L	L	D	S	G	A	I	Y	R	V	L	A	L	A	A	L	H	H	H	V	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	D
Query Conservation																																	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																												.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		M	P	T	.	L	L	R	V	Y	I	D	G	P	H	G	M	G	K	T	T	T	T	Q	L	L	D	I	V	Y	V	P	E	P	M	T	Y	W	R	V	L	G	A	S	E	T	I	A	N	I	Y	T	T	Q	H	R	L	D	Q	G	E	I	S	A	G	D	A	A	V	V	M	T	S	A	Q	I	T	M	G	M	P
Template Known Secondary structure					.								S	S	T	T	S	S						T	T															T	T	S	S	S															T	T	S	S
Template Predicted Secondary structure					.
Template SS confidence
		46	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	P	L	A	S	H	L	D	V	R	F	V	S	T	N	G	N	L	E	V	I	L	E	G	E	D	V	S	G	E	I	R	T	Q	E	V	A	N	A	A	S	Q	V	A	A	F	P	R	V	R	E	A	L	L	R	R	Q	R	A	F	R	E	L	P	G	L	I	A	D	G	R	D	M	G	T	V	V	F
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	V	T	D	A	V	L	A	P	H	I	G	G	E	A	P	P	A	L	T	L	I	F	D	R	H	P	I	A	A	L	L	C	Y	P	A	A	R	Y	L	M	G	S	M	T	P	Q	A	V	L	A	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	I	P	P	T
Template Known Secondary structure										G	G	G								S														T								T	T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																					.	.	.	.	190	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	A	P	V	K	I	F	L	D	A	S	S	E	E	R	A	H	R	R	M	L	Q	L	Q	E	K	G	F	S	V	N	F	E	R	L	L	A	E	I	K	E	R	D
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		L	P	G	T	N	I	V	L	G	A	L	P	E	D	R	H	I	D	R	L	A	K	R	Q	R	P	G	E	R	.	L	D	L	A	M	L	A	A	I	R	R	V	Y	G
Template Known Secondary structure			T	T																							T	T			.
Template Predicted Secondary structure																															.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions