Job Description P0A6I0 Confidence 98.74% Date Thu Jan 5 11:03:11 GMT 2012 Rank 130 Aligned Residues 167 % Identity 14% Template c1lw7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcriptional regulator nadr; PDBTitle: nadr protein from haemophilus influenzae Resolution 2.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	P	V	I	T	I	D	G	P	S	G	A	G	K	G	T	L	C	K	A	M	A	E	A	L	Q	W	H	L	L	D	S	G	A	I	Y	R	V	L	A	L	A	A	L	H	H	H	V	D	V	A	S	E	D	A	L	V	P	L	A	S	H	L	D	V	R	F	V	S	T	N	G	N	L	E	V	I	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	K	T	V	A	I	L	G	G	E	S	S	G	K	S	V	L	V	N	K	L	A	A	V	F	N	T	T	S	A	W	E	Y	G	R	E	F	V	F	E	K	L	G	G	D	E	Q	A	M	Q	Y	S	D	Y	P	Q	X	A	L	G	H	Q	R	Y	I	D	Y	A	V	R	H	S	H	K	I	A	F	I	D
Template Known Secondary structure		T										T	T	S													T	T							T	T							S	S	S	S		T	T	S	S		T	T	T																				S	S					S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	D	V	S	G	E	I	R	T	Q	E	V	A	N	A	A	S	Q	V	A	A	F	P	R	V	R	E	A	L	L	R	R	Q	R	A	F	R	E	L	P	G	L	I	A	D	G	R	D	M	G	T	V	V	F	P	D	A	P	V	K	I	F	L	D	A	S	S	E	E	R	A	H	R	R	M	L	Q	L	Q
Query Conservation
Alig confidence																	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	F	I	T	T	Q	A	F	C	I	Q	Y	E	G	.	.	.	.	.	K	A	H	P	F	L	D	S	X	I	K	E	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	V	T	I	L	L	K	N	N	T	E	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S														S	.	.	.	.	.													S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S											.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.	.	.	330	.	.	.																								.	.	.	.	.	.	340	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	G	F	S	V	N	F	E	R	L	L	A	E	I	K	E	R	D	D	R	D	R	N	R	A	V	A	P	L	V	P	A	A	D	A	L	V	L	D	S	T	T	L	S	I	E	Q	V	I	E	K	A	L	Q	Y	A	R	Q	K	L	A
Query Conservation
Alig confidence		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		.	.	.	.	Q	K	Q	R	Q	Q	F	Q	Q	L	L	K	K	L	.	.	.	.	.	.	.	.	.	.	.	L	D	K	Y	K	V	P	Y	I	E	I	E	S	P	.	S	Y	L	D	R	Y	N	Q	V	K	A	V	I	E	K	V	L	N
Template Known Secondary structure		.	.	.	.			S												.	.	.	.	.	.	.	.	.	.	.			G	G	G									S	.	S																T	S
Template Predicted Secondary structure		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
						357	.	.	360	.	.	.	.	.	.	.	.	.	370												.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions