Job Description P0A6I0 Confidence 96.08% Date Thu Jan 5 11:03:11 GMT 2012 Rank 368 Aligned Residues 175 % Identity 12% Template c1kjwA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:postsynaptic density protein 95; PDBTitle: sh3-guanylate kinase module from psd-95 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		T	A	I	A	P	V	I	T	I	D	G	P	S	G	A	G	.	K	G	T	L	C	K	A	M	A	E	A	L	Q	W	H	L	L	D	S	G	A	I	Y	R	V	L	A	L	A	A	L	H	H	H	V	D	V	A	S	E	D	A	L	V	P	L	A	S	H	L	D	V	R	F	V	S	T	N	G	N	L	E	V
Query Conservation																		.
Alig confidence											.							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Y	A	R	P	I	I	I	L	.	G	P	T	K	D	R	A	N	D	D	L	L	S	E	F	P	D	K	F	G	S	C	V	P	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	P	K	R	E	Y	E	I	D	G	R	D	Y	H	F
Template Known Secondary structure			S								.	S	T	T													T	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S				T	T			B	T	T	T	B
Template Predicted Secondary structure											.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		532	.	.	.	.	.	.	.	540		.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.																													.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		I	L	E	G	E	D	V	S	G	E	I	R	T	Q	E	V	A	N	A	A	S	Q	V	A	A	F	P	R	V	R	E	A	L	L	R	R	Q	R	A	F	R	E	L	P	G	L	I	A	D	G	R	D	M	G	T	V	V	F	P	D	A	P	.	.	.	V	K	I	F	L	D	A	S	S	E	E	R	A	H	R
Query Conservation																																																																.	.	.
Alig confidence																																							.	.																								.	.	.
Template Conservation																																							.	.
Template Sequence		V	S	S	R	E	K	M	E	K	D	I	Q	A	H	K	F	I	E	A	G	Q	Y	N	S	H	L	Y	G	T	S	V	Q	S	V	R	E	V	.	.	A	E	Q	G	K	H	C	I	L	D	V	S	A	N	A	V	R	R	L	Q	A	A	H	L	H	P	I	A	I	F	I	R	P	R	S	L	E	N	V	L	E
Template Known Secondary structure			S											T	T									T	T														.	.			T	T									T	T								T	T											S	S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.			620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	Q	L	Q	E	K	G	F	S	V	N	F	E	R	L	L	A	E	I	K	E	R	D	D	R	D	R	N	R	A	V	A	P	L	V	P	A	A	D	A	L	V	L	D	S	T	T	L	S	I	E	Q	V	I	E	K	A	L	Q	Y	A	R	Q
Query Conservation
Alig confidence						.	.	.	.	.	.	.																									.	.	.	.	.	.						.	.
Template Conservation						.	.	.	.	.	.	.																									.	.	.	.	.	.						.	.
Template Sequence		I	N	K	R	.	.	.	.	.	.	.	I	T	E	E	Q	A	R	K	A	F	D	R	A	T	K	L	E	Q	E	F	T	E	C	F	.	.	.	.	.	.	S	A	I	V	E	.	.	G	D	S	F	E	E	I	Y	H	K	V	K	R	V	I	E	D
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	S																				G	G	G		.	.	.	.	.	.	S					.	.		S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.																									.	.	.	.	.	.						.	.
Template SS confidence
		661	.	.	.								.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.							.	690	.	.	.			.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions