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Job DescriptionP39206
Confidence99.38%DateThu Jan 5 11:58:29 GMT 2012
Rank45Aligned Residues141
% Identity11%Templated2f9ca1
SCOP infoSingle-stranded left-handed beta-helix Trimeric LpxA-like enzymes YdcK-like
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40..... ....50.........60.........70.........80.
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Query Sequence  YAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRG. . DYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIG
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Template Sequence  PCTLYNNVRIGDNVWID. RADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYDRATVN
Template Known Secondary structure  S

SS

SS
S.S

SS
SS
S

SS
SS
SS






SSSTT



SS
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   83......90......... 100.........110.........120.........130.........140.........150.........160.
 
   82 .......90.........100.........110......
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Query Sequence  H. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GAILHGCLIGRDALVGMNSVIMDGAVIGEESIVA
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Template Sequence  HSRIVHQVQLYGNATITHAFIEHRAEVFDFALIEGDKDNNVWICDCAKVYGHARVIAGTEEDAIPTLRYSSQVAEHALIE
Template Known Secondary structure  S

SS

SS
S

SS

SS


SS



SS

SS


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SS

SS
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   117..120.........130.........140.....
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Query Sequence  AMSFVKAGFRGEKRQLLMGTPARAVRNVS
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Template Sequence  GNCVLKHHVLVGGHAEVRGGPILLDDRVL
Template Known Secondary structure  SS
T
SS
SSS
S
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   242.......250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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