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  | Insertion relative to template |
  | Deletion relative to template |
  | Catalytic residue from the CSA |
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Detailed help on interpreting your alignment |
  |   | 5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||
Query Sequence |   | A | F | E | G | L | I | P | V | V | H | P | T | A | F | V | H | P | S | A | V | L | I | G | D | V | I | V | G | A | G | V | Y | I | G | P | L | A | S | L | R | G | D | Y | G | R | L | I | V | Q | A | G | A | N | I | Q | D | G | C | I | M | H | G | Y | C | D | T | D | T | I | V | G | E | N | G | H | I | G | H | G | A |
Template Sequence |   | S | A | I | P | F | L | D | L | K | D | I | N | A | R | I | E | P | G | A | L | I | R | E | K | V | E | I | G | D | Q | A | V | I | X | X | G | A | I | L | N | I | G | . | . | . | A | V | V | G | A | G | T | X | I | D | X | G | A | . | . | . | . | V | L | G | G | R | A | T | V | G | K | H | C | H | I | G | A | G | T |
Template Known Secondary structure |   | B | S | B | T | T | S | S | ![]() | ![]() | T | T | ![]() | ![]() | B | S | S | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | . | . | . | ![]() | ![]() | T | T | ![]() | ![]() | T | T | . | . | . | . | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | |||||||||||||||||||||||||
Template Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | . | . | . | ![]() | ![]() | ![]() | . | . | . | . | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
  |   | 77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |||||||
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  |   | 85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | ||||||||||||||||||||
Predicted Secondary structure |   | . | . | . | . | . | . | . | . | . | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
Query Sequence |   | I | L | . | . | . | . | . | . | . | . | . | H | G | C | L | I | G | R | D | A | L | V | G | M | N | S | V | I | M | D | G | A | V | I | G | E | E | S | I | V | A | A | M | S | F | V | K | A | G | F | R | G | E | K | R | Q | L | L | M | G | T | P | A | R | A | V | R | N | V | |||||||||||
Template Sequence |   | V | L | A | G | V | I | E | P | P | S | A | A | P | V | V | I | E | N | E | V | V | I | G | A | N | A | V | V | L | E | G | V | R | V | G | E | G | A | V | V | A | A | G | A | V | V | V | . | . | E | D | V | P | A | H | T | V | V | A | G | V | P | A | K | V | I | K | Q | I | |||||||||||
Template Known Secondary structure |   | ![]() | ![]() | S | S | T | T | S | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | . | . | S | B | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||
Template Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | . | . | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
  |   | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |||||||||||||
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Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format |
Phyre is for academic use only
Please cite: Protein structure prediction on the web: a case study using the Phyre server | ||||||||
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX] | ||||||||
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