Return to main results Retrieve Phyre Job Id

Job DescriptionP39206
Confidence98.14%DateThu Jan 5 11:58:29 GMT 2012
Rank55Aligned Residues115
% Identity20%Templatec3brkX_
PDB info PDB header:transferaseChain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  HPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCLIGR
Query Conservation 
    
 
 
 
 
 
 

    
     
      
  
    
                     
          
  
Alig confidence 





























.....












































Template Conservation                                .....   
     
    
  



 
  

    
 



     

 
Template Sequence  DKSWPIWTYAEITPPAKFVHDDEDRRGSAV. . . . . SSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGR
Template Known Secondary structure 

SS












B
SS
B
.....S

SS
S
S

TT

TT

TT

T
Template Predicted Secondary structure 




















.....























Template SS confidence 















































































   294.....300.........310.........320... ......330.........340.........350.........360........
 
   94.....100.........110.........120..... ....130....
Predicted Secondary structure 



















..


Query SS confidence 































. .








Query Sequence  DALVGMNSVIMDGAVIGEESIVAAMSFVKAGF. . RGEKRQLLM
Query Conservation     
     
   
 

    






    .. 
    

 
Alig confidence 




.

























..








Template Conservation     
 . 


     
     

    
          
    
Template Sequence  HAQLS. NVVIDHGVVIPEGLIVGEDPELDAKRFRRTESGICLI
Template Known Secondary structure  T
.
TT

TT
SS
S
TTS
Template Predicted Secondary structure 

.


















Template SS confidence 










































   369370... ......380.........390.........400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions