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Job DescriptionP39206
Confidence99.68%DateThu Jan 5 11:58:29 GMT 2012
Rank40Aligned Residues132
% Identity23%Templatec2v0hA_
PDB info PDB header:transferaseChain: A: PDB Molecule:bifunctional protein glmu; PDBTitle: characterization of substrate binding and catalysis of the2 potential antibacterial target n-acetylglucosamine-1-3 phosphate uridyltransferase (glmu)
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40........
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Query Sequence  MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPG
Template Known Secondary structure 
GGG
SS

SS
TT

TT

TT

SS

TT

SS
TT
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   256...260.........270.........280.........290.........300.........310.........320.........330.....
 
   4950.........60.........70.........80........ .90.........100....
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Query Sequence  . . . . . . . . . . . . . . . . RLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHG. . . . . . . . CLIGRDALVGMNSVIM
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Template Sequence  AELAAETHVGNFVEIKKSTVGKGSKVNHLTYVG. . . . . DSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLV
Template Known Secondary structure 

TT
S

TT
.....S
TT

TT

SSSS



SS

TT
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   336...340.........350.........360........ .370.........380.........390.........400.........410
 
   105....110.........120.........130.........
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Query Sequence  DGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPAR
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Template Sequence  APVKVANGATIGAGTTIT. . RDVGENELVITRVAQ
Template Known Secondary structure  S
TT

TT

..S
B
TT






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   411........420........ .430.........440...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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