 |
Job Description | P37677 | Confidence | 41.46% | Date | Thu Jan 5 11:56:51 GMT 2012 |
Rank | 200 | Aligned Residues | 98 |
% Identity | 12% | Template | d2elca2 |
SCOP info | Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
| Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
| Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
|
Resolution | 1.55 |
|
 |
  |   |
397 | . | . | 400 | . | . | . | . | . | . | |
|
|
|
. | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | |
. | . | . | . | . | |
. | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  | . |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | V | T | G | G | P | A | H | S | . |
. |
. |
. |
D | V | W | M | Q | M | L | A | D | V | S | G | L | R | I | E | L | P | Q | V | E | E | T | G | . |
C | F | G | A | A | . |
L | A | A | R | V | G | T | G | V | Y | H | N | F | S | E | A | Q | R | D | L | R | H | P | V | R | T | L | L | P | D | M | T | A | H | Q |
Query Conservation |   |
|   |   |   |
|
|   |
|   |
| . | . | . | . |   |   |   |   |
|
|   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |
|   |   | . |   |   |
|
|
| . |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |   |
|   |
|
|
|   |   |   |
|   |
|
|
|
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
Template Sequence |   |
I | V | G | T | G | G | D | G | K | G | L | M | N | L | S | T | L | A | A | L | V | A | A | A | G | G | V | A | V | A | K | H | G | N | R | A | A | S | S | R | A | G | S | A | D | L | L | E | A | L | G | V | D | L | E | A | P | P | E | R | V | G | E | A | I | E | E | L | G | F | G | F | L | F | A | R | V | F | H | P |
Template Known Secondary structure |   |
 |  |  |
|
|
|
| S | S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
|
| T | T | T | T |
| S |  |  |  |  |  |  |  | T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |
| G |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
471 | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | Q | K | K | Y | Q | R | Y | Q | H | L | I | A | A | L | Q | G | F | H | A | R | I | K | E | H |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |
|
|   |   |
| . | . |
|   |
|
|   |   |
|   |
|   |   |
|
Template Sequence |   |
A | M | R | H | V | A | P | V | R | A | E | L | . |
. |
G | V | R | T | V | F | N | L | L | G | P | L |
Template Known Secondary structure |   |
G | G | G | G | T |  |  |  |  |  |  |  | . | . |
| S |
|
|  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | |
|
. | . | 170 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|