Return to main results Retrieve Phyre Job Id

Job DescriptionP37677
Confidence100.00%DateThu Jan 5 11:56:51 GMT 2012
Rank20Aligned Residues238
% Identity27%Templated1r59o1
SCOP infoRibonuclease H-like motif Actin-like ATPase domain Glycerol kinase
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  QYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIRALLTHSGVSGEQIVGIGISAQG
Query Conservation   
 








 

 
 
  
                 
  
 
           
  
          
 

 

   
Alig confidence 















































































Template Conservation   
 








 
  
 
  
  
              
  
 
           
             
  
 

   
Template Sequence  NYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQR
Template Known Secondary structure 
B

SSB
B


SSS
B





B





STT

B

GGGSSSTTTTTSTTTT

TTS


S
Template Predicted Secondary structure 
























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   83......90. ........100.........110.........120.........130.........140.........150..... ..
Predicted Secondary structure 




.























....
Query SS confidence 








.































































. . . .

Query Sequence  KGLFLLDKN. DKPLGNAILSSDRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGC. . . . VM
Query Conservation   
 
  
  .
 

   
 
 
 
       
            

          

 

    

       ....  
Alig confidence 








.































































....

Template Conservation     
  
   
  
   
 
 
 
       
            

          

 

    
              
Template Sequence  ETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFG
Template Known Secondary structure  S



B
SSS


SS

B
TT

SS
T
TTTT


SSTTSSSSSSSSSTTTTTT

B

Template Predicted Secondary structure 






























Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   158.160......... 170.........180.........190.........200.........210.........220.........230.....
Predicted Secondary structure 


..

































Query SS confidence 











. .

































































Query Sequence  MTHDYLRWCLTG. . VKGCEESNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGT
Query Conservation     


   


..    
 
 

 
 
 
     
   

   

      

 
   
   
 
    
   

  
 
Alig confidence 











..

































..
















...........

Template Conservation     
 
   


      
 
 

 


 
     
    
   

  ..  

 
       
   ...........
 
Template Sequence  TIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPS. . SMLPEVKSNSEVYGHTR. . . . . . . . . . . SV
Template Known Secondary structure 
TSSSS



TTSSSB
TTTSSB
TTTT

S..SSS


SSS

B

S...........SS
Template Predicted Secondary structure 


















..














...........

Template SS confidence 















































































   165....170.........180.........190.........200.........210.. .......220......... 230.
 
   236...240.........250...
Predicted Secondary structure 





Query SS confidence 

















Query Sequence  PVVGGLFDVVSTALCAGI
Query Conservation 

  
  
   
  
 
 
Alig confidence 

















Template Conservation 

  
  
  

  
 

Template Sequence  PIAGMAGDQQAALFGQMA
Template Known Secondary structure 


TTTSTT
Template Predicted Secondary structure 





Template SS confidence 

















   239240.........250......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions