Job Description P37677 Confidence 100.00% Date Thu Jan 5 11:56:51 GMT 2012 Rank 10 Aligned Residues 483 % Identity 21% Template c3g25B_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: 1.9 angstrom crystal structure of glycerol kinase (glpk) from2 staphylococcus aureus in complex with glycerol. Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	Y	W	L	G	L	D	C	G	G	S	W	L	K	A	G	L	Y	D	R	E	G	R	E	A	G	V	Q	R	L	P	L	C	A	L	S	P	Q	P	G	W	A	E	R	D	M	A	E	L	W	Q	C	C	M	A	V	I	R	A	L	L	T	H	S	G	V	S	G	E	Q	I	V	G	I	G	I	S	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	Y	I	L	S	I	D	Q	G	T	T	S	S	R	A	I	L	F	N	Q	K	G	E	I	A	G	V	A	Q	R	E	F	K	Q	Y	F	P	Q	S	G	W	V	E	H	D	A	N	E	I	W	T	S	V	L	A	V	X	T	E	V	I	N	E	N	D	V	R	A	D	Q	I	A	G	I	G	I	T	N	Q
Template Known Secondary structure												S	S									T	T	S													B			S	T	T																								S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.
Predicted Secondary structure												.																																																																	.	.	.	.
Query SS confidence												.																																																																	.	.	.	.
Query Sequence		G	K	G	L	F	L	L	D	K	N	.	D	K	P	L	G	N	A	I	L	S	S	D	R	R	A	M	E	I	V	R	R	W	Q	E	D	G	I	P	E	K	L	Y	P	L	T	R	Q	T	L	W	T	G	H	P	V	S	L	L	R	W	L	K	E	H	E	P	E	R	Y	A	Q	I	G	C	.	.	.	.	V
Query Conservation												.																																																																	.	.	.	.
Alig confidence												.																																																																	.	.	.	.
Template Conservation
Template Sequence		R	E	T	T	V	V	W	D	K	H	T	G	R	P	I	Y	H	A	I	V	W	Q	S	R	Q	T	Q	S	I	C	S	E	L	K	Q	Q	G	Y	E	Q	T	F	R	D	K	T	G	L	L	L	D	P	Y	F	A	G	T	K	V	K	W	I	L	D	N	V	E	G	A	R	E	K	A	E	N	G	D	L	L	F
Template Known Secondary structure		S	S							T	T	T			B	S	S					T	T			T	T										T	T										S			S	S	T	T	S												S	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		M	M	T	H	D	Y	L	R	W	C	L	T	G	V	K	G	.	.	C	E	E	S	N	I	S	E	S	N	L	Y	N	M	S	L	G	E	Y	D	P	C	L	T	D	W	L	G	I	A	E	I	N	H	A	L	P	P	V	V	G	S	A	E	I	C	G	E	I	T	A	Q	T	A	A	L	T	G	L	K	A	G
Query Conservation																		.	.
Alig confidence																		.	.																																.	.																	.	.	.	.
Template Conservation																																																			.	.																	.	.	.	.
Template Sequence		G	T	I	D	T	W	L	V	W	K	L	S	G	K	A	A	H	I	T	D	Y	S	N	A	S	R	T	L	X	F	N	I	H	D	L	E	W	D	D	E	L	L	E	L	L	T	V	P	K	.	.	N	X	L	P	E	V	K	A	S	S	E	V	Y	G	K	T	.	.	.	.	I	D	Y	H	F	Y	G	Q	E
Template Known Secondary structure													T	T	T											T	T	S	S	S			T	T	T	T										T	T			G	.	.	G	G							S								.	.	.	.		G	G	G	T	T	T
Template Predicted Secondary structure																																																			.	.																	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		T	P	V	V	G	G	L	F	D	V	V	S	T	A	L	C	A	G	I	E	D	E	F	T	L	N	A	V	M	G	T	W	A	V	T	S	G	I	T	R	G	L	R	D	G	E	A	.	.	.	H	P	Y	V	Y	G	R	Y	V	N	D	G	E	F	I	V	H	E	A	S	P	T	S	S	G	N	L	E	W	F
Query Conservation																																																	.	.	.
Alig confidence																																																	.	.	.
Template Conservation
Template Sequence		V	P	I	A	G	V	A	G	D	Q	Q	A	A	L	F	G	Q	A	C	F	E	R	G	D	V	K	N	T	Y	G	T	G	G	F	X	L	X	N	T	G	D	K	A	V	K	S	E	S	G	L	L	T	T	I	A	Y	G	I	D	G	K	V	N	Y	A	L	E	G	S	I	F	V	S	G	S	A	I	Q	W	L
Template Known Secondary structure																		T	T			S	T	T							S	S	S								T	T	S					S	S	S										T	T											S		S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		T	A	Q	W	G	E	I	S	F	D	E	I	N	Q	A	V	A	S	L	P	K	A	G	G	D	L	F	F	L	P	F	L	Y	G	S	N	A	G	L	E	.	.	.	M	T	S	G	F	Y	G	M	Q	A	I	H	T	R	A	H	L	L	Q	A	I	Y	E	G	V	V	F	S	H	M	T	H	L	N	R	M	R
Query Conservation																																										.	.	.
Alig confidence																																										.	.	.
Template Conservation
Template Sequence		R	D	G	L	R	X	I	N	S	A	P	Q	S	E	S	Y	A	T	R	V	D	S	T	E	G	V	Y	V	V	P	A	F	V	G	L	G	T	P	Y	W	D	S	E	A	R	G	A	I	F	G	L	T	R	G	T	E	K	E	H	F	I	R	A	T	L	E	S	L	C	Y	Q	T	R	D	V	X	E	A	X	S
Template Known Secondary structure				T	S				S	S	G	G	G							T	S	S			T	T							T	T		B		T	T	T		B	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		389		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		E	.	R	F	T	D	V	H	T	L	R	V	T	G	G	P	A	H	S	D	V	W	M	Q	M	L	A	D	V	S	G	L	R	I	E	L	P	Q	V	E	E	T	G	C	F	G	A	A	L	A	A	R	V	G	T	G	V	Y	H	N	F	S	E	A	Q	R	D	L	R	H	P	V	R	T	L	L	P	D	M	T
Query Conservation			.
Alig confidence			.																																																																			.
Template Conservation																																																																						.
Template Sequence		K	D	S	G	I	D	V	Q	S	L	R	V	D	G	G	A	V	K	N	N	F	I	X	Q	F	Q	A	D	I	V	N	T	S	V	E	R	P	E	I	Q	E	T	T	A	L	G	A	A	F	L	A	G	L	A	V	G	F	W	E	S	K	D	D	I	A	K	N	W	.	K	L	E	E	K	F	D	P	K	X	D
Template Known Secondary structure									S						S	G	G	G	G													T	S						S																	T	T	S	S	S		T								.										S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Q	L	Y	Q	K	K	Y	Q	R	Y	Q	H	L	I	A	A	L	Q	G	F	H	A	R
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		E	G	E	.	R	E	K	L	Y	R	G	W	K	K	A	V	E	A	T	Q	V	F	K	T	E
Template Known Secondary structure					.
Template Predicted Secondary structure					.
Template SS confidence
		475	.	.		.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.