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Job DescriptionP37677
Confidence99.14%DateThu Jan 5 11:56:51 GMT 2012
Rank26Aligned Residues271
% Identity20%Templatec2qm1D_
PDB info PDB header:transferaseChain: D: PDB Molecule:glucokinase; PDBTitle: crystal structure of glucokinase from enterococcus faecalis
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIRALLTHSGVSGEQIVGIGISAQG
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Template Sequence  KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILE. . . . . . . . DGKHIVPSIIESIRHRIDLYNXKKEDFVGIGXGTP.
Template Known Secondary structure 

SSTT




TT........TTTTTT

GGGS.
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   3......10.........20.........30........ .40.........50.........60.........70...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  KGLFLLDKNDKPLGNAILSSDRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTHDY
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Template Sequence  . GSVDIEKGTVVGAYNLNWTTVQP. . . . . . . . . . . VKEQIESALGIPFALD. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .STTTT
BGGGTB
S
B
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   74.....80.........90...... ...100.........110..
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  LRWCLTGVKGCEESNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGTPVVGGLF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . N
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   113
 
   243......250 .........260.........270......... 280.........290.........300.......
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Query Sequence  DVVSTALC. . . . . AGIEDEFTLNAVMGTWAVTSGITRGLRDG. . . . . . . . . . EAHPYVYGRYVNDGEFIVHEASPTSSGN
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Template Sequence  DANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVSSATGV
Template Known Secondary structure  STTTT
SSSSSTT


SSS
TT
GGGSBS
TTS
B
TTS
BSBTS
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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   308.310....... ..320.........330.........340.........350.........360.........370.
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Query Sequence  LEWFTAQWGE. . . . . . . . . . . . . . . . ISFDEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAHLLQA
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Template Sequence  VRVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FALX
Template Known Secondary structure  GGG

S

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   194.....200.........210.........220.........230.... ....
 
   372.......380.........390.........400..... ....410....... ..420....... ..430........
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Query Sequence  IYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAH. SDVWMQMLADVS. . . . . . . . . . GLRIELPQVE. ETGCFGAALAA
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Template Sequence  VVDRVCFYLGLATGNLGNT. LNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLA
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SSSGGGGTTS
TT

SSGGGG
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   239240.........250....... ..260.........270.........280.........290.........300.........310......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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