Job Description P37677 Confidence 100.00% Date Thu Jan 5 11:56:51 GMT 2012 Rank 17 Aligned Residues 463 % Identity 17% Template c2cgkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:l-rhamnulose kinase; PDBTitle: crystal structure of l-rhamnulose kinase from escherichia2 coli in an open uncomplexed conformation. Resolution 2.46 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		T	Q	Y	W	L	G	L	D	C	G	G	S	W	L	K	A	G	L	Y	D	R	E	G	R	E	A	G	V	Q	R	L	P	L	C	A	L	S	P	Q	.	.	.	.	P	G	W	A	E	R	D	M	A	E	L	W	Q	C	C	M	A	V	I	R	A	L	L	T	H	S	G	V	S	G	E	Q	I	V	G	I	G
Query Conservation																																									.	.	.	.
Alig confidence																																									.	.	.	.																											.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		F	R	N	C	V	A	V	D	L	G	A	S	S	G	R	V	M	L	A	R	Y	E	R	E	C	R	S	L	T	L	R	E	I	H	R	F	N	N	G	L	H	S	Q	N	G	Y	V	T	W	D	V	D	S	L	E	S	A	I	R	L	G	L	N	K	V	C	A	A	G	.	.	.	.	I	A	I	D	S	I	G
Template Known Secondary structure												S	S											T	T	T	T																	S	S	S																							T	T	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	Q	G	K	G	L	F	L	L	D	K	N	D	K	P	L	G	N	A	I	L	S	S	D	R	R	A	M	E	I	V	R	R	W	Q	E	D	G	I	P	E	K	L	Y	P	L	T	R	Q	T	L	W	T	G	H	P	V	S	L	L	R	W	L	K	E	H	E	P	E	R	Y	A	Q	I	G	C	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	T	W	G	V	D	F	V	L	L	D	Q	Q	G	Q	R	V	G	L	P	V	A	Y	R	D	S	R	T	N	G	L	M	A	Q	A	Q	Q	Q	L	G	K	R	D	I	Y	Q	R	S	G	I	Q	F	L	P	F	N	T	L	Y	Q	L	R	A	L	T	E	Q	Q	P	E	L	I	P	H	I	A	H	A	L
Template Known Secondary structure				B		S	S							T	T	S		B		S			B		T	T		S	T	T	T	T									T	T														T	T														T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	H	D	Y	L	R	W	C	L	T	G	V	K	G	C	E	E	S	N	I	S	E	S	N	L	Y	N	M	S	L	G	E	Y	D	P	C	L	T	D	W	L	G	I	A	E	I	N	H	A	L	P	P	V	V	G	S	A	E	I	C	G	E	I	T	A	Q	T	A	A	L	T	G	L	K	A	G	T	P	V
Query Conservation
Alig confidence																																																.	.																											.	.	.	.	.
Template Conservation																																																.	.																											.	.	.	.	.
Template Sequence		L	M	P	D	Y	F	S	Y	R	L	T	G	K	M	N	W	E	Y	T	N	A	T	T	T	Q	L	V	N	I	N	S	D	D	W	D	E	S	L	L	A	W	S	G	A	N	K	.	.	A	W	F	G	R	P	T	H	P	G	N	V	I	G	H	W	I	C	P	Q	G	N	E	I	P	V	.	.	.	.	.	V
Template Known Secondary structure													S					B						T	T	T		B		T	T	T	S	S	B									T			G	.	.	G	G					B		T	T									S	S	S						.	.	.	.	.
Template Predicted Secondary structure																																																.	.																											.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		V	G	G	L	F	D	V	V	S	T	A	L	C	A	G	I	E	D	E	F	T	L	N	A	V	M	G	T	W	A	V	T	S	G	I	T	R	G	L	R	D	G	E	A	.	.	H	P	Y	V	Y	G	R	Y	V	N	D	G	E	F	I	V	H	E	A	S	P	T	S	S	G	N	L	E	W	F	T	A	Q	W
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		A	V	A	S	H	D	T	A	S	A	V	I	A	S	P	L	N	G	S	R	A	A	Y	L	S	S	G	T	W	S	L	M	G	F	E	S	Q	T	P	F	T	N	D	T	A	L	A	A	N	I	T	N	E	G	G	A	E	G	R	Y	R	V	L	K	N	I	M	G	L	W	L	L	Q	R	V	L	Q	E	R	Q
Template Known Secondary structure						B								T	S				S	S	S							S	S	S								S	S				S						T	T							G	G	G											T										T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																								.															.	.	.																																								.
Query SS confidence																								.															.	.	.																																								.
Query Sequence		G	E	I	S	F	D	E	I	N	Q	A	V	A	S	L	P	K	A	G	G	D	L	.	F	F	L	P	F	L	Y	G	S	N	A	G	L	E	.	.	.	M	T	S	G	F	Y	G	M	Q	A	I	H	T	R	A	H	L	L	Q	A	I	Y	E	G	V	V	F	S	H	M	T	H	L	N	R	M	R	E	R	.
Query Conservation																								.															.	.	.																																								.
Alig confidence		.																						.															.	.	.																																								.
Template Conservation		.
Template Sequence		.	I	N	D	L	P	A	L	I	A	A	T	Q	A	L	P	A	C	R	F	I	I	N	P	N	D	D	R	F	I	N	P	D	E	M	C	S	E	I	Q	A	A	C	R	E	M	A	Q	P	I	P	E	S	D	A	E	L	A	R	C	I	F	D	S	L	A	L	L	Y	A	D	V	L	H	E	L	A	Q	L	R
Template Known Secondary structure		.												T	T	S		S	S	S	S				T	T	S	G	G	G	T	S		S													T	T						S
Template Predicted Secondary structure		.
Template SS confidence
			312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.			.	.	.	460	.	.	.	.	.	.		.
Predicted Secondary structure																																																																				.	.											.
Query SS confidence																																																																				.	.											.
Query Sequence		F	T	D	V	H	T	L	R	V	T	G	G	P	A	H	S	D	V	W	M	Q	M	L	A	D	V	S	G	L	R	I	E	L	P	Q	V	E	E	T	G	C	F	G	A	A	L	A	A	R	V	G	T	G	V	Y	H	N	F	S	E	A	Q	R	D	L	R	.	.	H	P	V	R	T	L	L	P	D	M	.	T
Query Conservation																																																																				.	.											.
Alig confidence																																						.																														.	.											.
Template Conservation																																						.
Template Sequence		G	E	D	F	S	Q	L	H	I	V	G	G	G	C	Q	N	T	L	L	N	Q	L	C	A	D	A	C	G	I	R	V	I	A	G	P	V	.	E	A	S	T	L	G	N	I	G	I	Q	L	M	T	L	D	E	L	N	N	V	D	D	F	R	Q	V	V	S	T	T	A	N	L	T	T	F	T	P	N	P	D	S
Template Known Secondary structure		T	S			S						S	G	G	G	G													T	S							S	.	S														T	T	S		S	S												S									T	T	S
Template Predicted Secondary structure																																						.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		468	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Q	L	Y	Q	K	K	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	A	H	Y	V	A	L	I	H
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		470	.	.	.	.	.	.	.	.	.