 |
Job Description | P37677 | Confidence | 97.27% | Date | Thu Jan 5 11:56:51 GMT 2012 |
Rank | 72 | Aligned Residues | 99 |
% Identity | 14% | Template | c1woqB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:inorganic polyphosphate/atp-glucomannokinase; |
PDBTitle: crystal structure of inorganic polyphosphate/atp-glucomannokinase from2 arthrobacter sp. strain km at 1.8 a resolution
|
Resolution | 1.80 Å |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | L | G | L | D | C | G | G | S | W | L | K | A | G | L | Y | D | R | E | G | R | E | A | G | V | Q | R | L | P | L | C | A | L | S | P | Q | P | G | W | A | E | R | D | M | A | E | L | W | Q | C | C | M | A | V | I | R | A | L | L | T | H | S | G | V | S | G | E | Q | I | V | G | I | G | I | S | A | Q | G | K | G |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
L | I | G | I | D | I | G | G | T | G | I | K | G | G | I | V | D | L | K | K | G | K | L | L | G | E | R | F | R | V | P | T | P | Q | P | A | . |
. |
. |
. |
. |
. |
T | P | E | S | V | A | E | A | V | A | L | V | V | A | E | L | S | A | R | P | E | . |
. |
. |
A | P | A | A | G | S | P | V | G | V | T | F | P | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | T | T | T | T |  |  | S | S |
|
|  |  |  |  |
|
| S | S |
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T | . | . | . |
|
|
| T | T |
|
|  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | L | L | D | K | N | D | K | P | L | G | N | A | I | L | S | S | D | R | R | A | M | E | I | V | R | R |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |
|
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
I | I | Q | H | G | V | V | H | S | A | A | N | V | D | K | S | W | L | N | T | D | I | D | A | L | L | T | A |
Template Known Secondary structure |   |
|  |  | T | T |  |  |
|
|
| T | T | S |
| G | G | G | T | T |
| B |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|