Job Description P69908 Confidence 99.91% Date Thu Jan 5 12:12:17 GMT 2012 Rank 91 Aligned Residues 308 % Identity 16% Template d2ctza1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.60

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence												.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation												.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	T	V	D	V	L	E	K	R	.	.	.	.	L	A	A	L	E	G	G	K	A	.	.	.	.	.	.	.	A	L	A	T	A	S	G	H	A	A	Q	F	L	A	L	T	T	L	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	A	G	D	N	I	V	S	T	P	N	L	Y	G	G	T	F	N	Q
Template Known Secondary structure												.	.	.	.						T		S		.	.	.	.	.	.	.					S	S													.	.	.	.	.	.	.	.	.	.	.	.			T	T							S
Template Predicted Secondary structure												.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A
Query Conservation
Alig confidence																				.	.	.	.	.																																												.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																																												.	.	.	.	.	.
Template Sequence		F	K	V	T	L	K	R	L	G	I	E	V	R	F	T	S	R	E	.	.	.	.	.	E	R	P	E	E	F	L	A	L	T	D	E	K	T	R	A	W	W	V	E	S	I	G	N	P	A	L	N	I	P	D	L	E	A	L	A	Q	A	A	R	E	K	G	.	.	.	.	.	.	V	A	L	I	V	D	N	T
Template Known Secondary structure				T					T	T								T	T	.	.	.	.	.												T	T								S	S		T	T	T																	T	.	.	.	.	.	.								G
Template Predicted Secondary structure																				.	.	.	.	.																																												.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I
Query Conservation
Alig confidence									.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		F	G	M	G	G	Y	L	.	.	.	.	.	.	.	L	R	P	L	A	W	G	A	A	L	V	T	H	S	L	T	K	W	V	G	G	H	G	A	V	I	A	G	A	I	V	D	G	G	N	F	P	W	E	G	G	R	Y	P	L	L	T	E	P	Q	P	G	Y	H	G	L	R	L	T	E	A	F	G	E	L	A
Template Known Secondary structure		G	G	G	G	G	T	S	.	.	.	.	.	.	.			G	G	G	G	T		S						T	T	T	T	T	T		S	S											S		S			T	T	T	T						S		B	G	G	G	T	T	B							G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		326	.	.																			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	V	K	A	R	V	D	G	L	R	D	Q	G	Q	A	L	G	P	F	E	A	W	V	V	L	L	G	M	E	T	L	S	L	R	A	E	R	H	V	E	N	T	L	H	L	A	H	W	L	L	E	Q	P	Q	V	A	W	V	N	Y	P	G	L	P	H	H	P	H	H	D	R	A	Q	K	Y	F	K	G	K
Template Known Secondary structure									T																						T	T																					T		T	T							T	T	S	T	T		T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
			375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.																					.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F
Query Conservation		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.											.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation													.	.	.																																																													.	.	.	.
Template Sequence		P	G	A	V	L	T	F	G	L	K	G	.	.	.	G	Y	E	A	A	K	R	F	I	S	R	L	K	L	I	S	H	L	A	N	V	G	D	T	R	T	L	A	I	H	P	A	S	T	T	H	S	Q	L	S	P	E	E	Q	A	Q	A	G	V	S	P	E	M	V	R	L	S	V	G	L	.	.	.	.	E	H
Template Known Secondary structure				S							T	T	.	.	.											T		S	S	S				S					S	S						G	G	G	T	T	T	T	T	S									T			T	T								S	.	.	.	.	S
Template Predicted Secondary structure													.	.	.																																																													.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.					.	.
		434	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	L	L	E	D	Y	K	A	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	D	L	K	A	E	L	K	E	A	L
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions