Job Description P69908 Confidence 100.00% Date Thu Jan 5 12:12:17 GMT 2012 Rank 14 Aligned Residues 385 % Identity 15% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																														.						.
Query SS confidence																								.	.																														.						.
Query Sequence		F	P	L	H	E	M	R	D	D	V	A	F	Q	I	I	N	D	E	L	Y	L	D	.	.	G	N	A	R	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	.	N	W	I	D	K	.	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L
Query Conservation																								.	.																														.						.
Alig confidence					.	.																		.	.																														.						.
Template Conservation					.	.
Template Sequence		L	P	E	.	.	V	D	E	L	T	L	V	R	H	Y	T	G	L	S	R	R	Q	V	G	V	D	T	T	F	Y	P	L	G	S	C	T	M	K	Y	N	P	K	L	H	E	E	A	A	R	L	F	A	D	L	H	P	Y	Q	D	P	R	T	A	Q	G	A	L	R	L	M	W	E	L	G	E	Y	L	K	A	L
Template Known Secondary structure					.	.															T	T				T	T	T	S				B	T	T	T															T	T	S	S			T	T	S		G	G	G
Template Predicted Secondary structure					.	.
Template SS confidence
		42	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L
Query Conservation
Alig confidence								.	.	.	.	.	.																																		.	.	.																															.
Template Conservation								.	.	.	.	.	.																																		.	.	.																															.
Template Sequence		T	G	M	D	A	I	.	.	.	.	.	.	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G	E	G	R	T	R	R	V	.	.	.	V	L	V	P	D	S	A	H	G	S	N	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	S	G	P	E	.	G
Template Known Secondary structure			T		S			.	.	.	.	.	.					S	S																			T	T		T	T	T				.	.	.					T	T	S		T									T	T								B		T	T	.	S
Template Predicted Secondary structure								.	.	.	.	.	.																																		.	.	.																															.
Template SS confidence
		120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V
Query Conservation
Alig confidence																																														.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		E	V	D	L	E	A	L	K	R	E	L	G	P	H	V	A	A	L	M	L	T	N	P	N	T	L	G	L	F	E	R	R	I	L	E	I	S	R	L	C	K	E	A	G	.	.	.	.	.	.	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	W	A	R	P	.	.	.	.	.	.	G	D	M	G	F
Template Known Secondary structure		S	B										S	T	T								S	S		T	T	S				T	T												T	.	.	.	.	.	.							G	G	G	G	G	G	T	T	T	T				.	.	.	.	.	.				T
Template Predicted Secondary structure																																														.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.									.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.																.	.	.	.	.	.	.	.
Query Sequence		K	S	I	S	A	S	G	H	K	F	G	L	A	P	.	.	.	.	.	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	.	.	.	.	.	.	.	.	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L
Query Conservation																.	.	.	.	.																.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	V	H	L	N	L	H	K	T	F	T	V	P	H	G	G	G	G	P	G	S	G	P	V	G	V	K	A	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F	Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F	L	A	L	V	R	A	W	A	Y	I	R	T	L
Template Known Secondary structure		S						T	T	T	T	T					T	T	S											G	G	G	G	G	G			S							S	S									T	T					S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E
Query Conservation
Alig confidence																											.									.	.	.													.	.	.	.
Template Conservation																											.									.	.	.													.	.	.	.
Template Sequence		G	L	E	G	L	K	K	A	A	A	L	A	V	L	N	A	R	Y	L	K	E	L	L	K	E	.	K	G	Y	R	V	P	Y	D	.	.	.	G	P	S	M	H	E	F	V	A	Q	P	P	.	.	.	.	E	G	F	R	A	L	D	L	A	K	G	L	L	E	L	G	F	H	P	P	T	V	Y	F	P	L	I
Template Known Secondary structure																											.	T	T		B		S	S		.	.	.	S	S			S					B		S	.	.	.	.	T	T													T	T							S		S	T	T
Template Predicted Secondary structure																											.									.	.	.													.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		V	K	E	A	.	.	L	M	V	E	P	T	E	T	E	A	K	E	T	L	E	A	F	A	E	A	M	G	A	L	L	K	K	P	K	E
Template Known Secondary structure		S	T	T		.	.							T	T	S																	T	S
Template Predicted Secondary structure						.	.
Template SS confidence
		410	.	.	.			.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.