Job Description P69908 Confidence 100.00% Date Thu Jan 5 12:12:17 GMT 2012 Rank 22 Aligned Residues 352 % Identity 14% Template d1vjoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.70

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	L	D	G	N	A	R	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A
Query Conservation
Alig confidence																																				.	.	.	.	.																												.	.	.	.
Template Conservation																																				.	.	.	.	.																												.	.	.	.
Template Sequence		L	E	P	L	E	V	P	S	R	L	L	L	G	P	G	P	S	N	A	H	P	S	V	L	Q	A	X	N	V	S	P	V	G	H	.	.	.	.	.	L	D	P	A	F	L	A	L	X	D	E	I	Q	S	L	L	R	Y	V	W	Q	T	E	N	P	L	T	.	.	.	.	I	A	V	S	G	T	G	T	A	A
Template Known Secondary structure				S										S	S	S													S	S					T	.	.	.	.	.	T	S																			T				S			.	.	.	.				S	S
Template Predicted Secondary structure																																				.	.	.	.	.																												.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.
Predicted Secondary structure																																						.	.																																				.
Query SS confidence																																						.	.																																				.
Query Sequence		C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	.	N	T	I	G	V	V
Query Conservation																																						.	.																																				.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																	.	.																					.															.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		X	E	A	T	I	A	N	A	.	.	.	.	.	.	.	.	.	.	.	.	V	E	P	G	D	V	V	L	I	G	V	A	G	Y	F	G	N	R	L	V	D	X	A	G	R	Y	G	A	D	V	R	T	I	S	K	P	W	G	.	E	V	F	S	L	E	E	L	R	T	A	L	E	T	H	R	P	A	I	L	A
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.			T	T								S	S													T	T										T	T	.																		S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		86	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W
Query Conservation
Alig confidence																											.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		L	V	H	A	E	T	S	T	G	A	R	Q	P	L	E	G	V	G	E	L	C	R	E	F	G	.	.	.	.	.	.	T	L	L	L	V	D	T	V	T	S	L	G	G	V	P	.	.	.	.	.	.	.	I	F	L	D	A	W	G	V	D	L	A	Y	S	C	S	Q	K	G	L	G	C	S	P	G	A	S	P
Template Known Secondary structure				S			T	T	T	T						T	T									T	.	.	.	.	.	.								T	T	T	T	T	T	S		.	.	.	.	.	.	.			T	T	T	T	T		S						S	S	S	T	T		S		S	S
Template Predicted Secondary structure																											.	.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.											.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	.	.	.	.	.	.	.	.	.	.	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence						.																		.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		F	T	X	S	.	S	R	A	I	E	K	L	Q	R	R	R	T	K	V	A	N	W	Y	L	D	X	N	L	L	G	K	Y	W	G	S	E	R	V	Y	H	H	T	A	P	I	N	L	Y	Y	A	L	R	E	A	L	R	L	I	A	Q	E	G	L	A	N	C	W	Q	R	H	Q	K	N	V	E	Y	L	W	E	R
Template Known Secondary structure						.									T		S	S			S		S	T	T										S	T	T					S
Template Predicted Secondary structure						.
Template SS confidence
		220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.
Predicted Secondary structure																																													.																											.
Query SS confidence																																													.																											.
Query Sequence		I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	.	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	.	R	R	G	F	E	M	D	F	A
Query Conservation																																													.																											.
Alig confidence							.									.														.	.	.	.												.																		.	.	.							.
Template Conservation							.									.														.	.	.	.																														.	.	.
Template Sequence		L	E	D	I	G	.	L	S	L	H	V	E	K	E	.	Y	R	L	P	T	L	T	T	V	C	I	P	D	.	.	.	.	G	V	D	G	K	A	V	A	R	R	L	L	N	E	H	N	I	E	V	G	G	G	L	G	E	L	A	G	K	.	.	.	V	W	R	V	G	L	X	G	F	N	S	R	K	E	S	V
Template Known Secondary structure					T	T	.			B	S	S		G	G	.	G	B		S	S								T	.	.	.	.	T																							G	G	G	T	T	T	.	.	.								G	G	G		S
Template Predicted Secondary structure							.									.														.	.	.	.																														.	.	.
Template SS confidence
		299	300	.	.	.		.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.					.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	L	E	D	Y	K	A	S	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	L	I	P	A	L	E	Q	V	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions