Job Description P69908 Confidence 99.90% Date Thu Jan 5 12:12:17 GMT 2012 Rank 108 Aligned Residues 337 % Identity 12% Template d1tpla_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.30

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D
Query Conservation
Alig confidence																																.	.	.	.						.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.						.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	Q	W	A	G	M	M	M	G	D	E	A	Y	A	G	S	E	N	F	Y	H	L	E	R	T	V	Q	E	L	.	.	.	.	F	G	F	K	H	.	.	.	.	.	.	.	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	.	.	.	.	.	.	.	.	.	.	.	.	I	K	P	G
Template Known Secondary structure									T	T					S	S	S															.	.	.	.				S		.	.	.	.	.	.	.					S	S													.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																.	.	.	.						.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110													.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.																	.	.	.	.
Query SS confidence																																																.	.	.	.																	.	.	.	.
Query Sequence		K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	.	.	.	.	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	.	.	.	.	N	Y	E	F	P	Q	P	L	H	D
Query Conservation																																																.	.	.	.																	.	.	.	.
Alig confidence																																	.															.	.	.	.																	.	.	.	.
Template Conservation																																	.
Template Sequence		Q	Y	V	A	G	N	M	Y	K	N	G	A	V	F	V	D	I	V	R	D	E	A	H	D	A	G	L	N	I	A	F	.	K	G	D	I	D	L	K	K	L	Q	K	L	I	D	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	R	E
Template Known Secondary structure							S					S	S						B		T	T	S	S		S	S				T	T	.	T	T		B														G	G	G								S	S	B		S	T	T		B
Template Predicted Secondary structure																																	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.											.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	.	.	.	.	.	.	.	.	.	.	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.																		.
Template Conservation								.	.	.	.	.	.																																																									.
Template Sequence		L	T	A	A	H	G	.	.	.	.	.	.	I	K	V	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	Q	G	F	E	N	K	S	I	A	E	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I	G	.	G	F	L	C	M	N	D	D	E	M	F
Template Known Secondary structure						T	T	.	.	.	.	.	.								T	T												S	T	T		T	T	S												T	S	S						T	T	T	T	T			S	S		.
Template Predicted Secondary structure								.	.	.	.	.	.																																																									.
Template SS confidence
		203	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.																																									.
Template Conservation																			.	.	.	.	.	.	.	.																																									.
Template Sequence		S	S	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	G	.	.	.	.	.	.	.	.	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	K	A	A	.	G	V	P	I	V	E	P	V	G	G	H	A	V	F
Template Known Secondary structure													S	S			S	S	.	.	.	.	.	.	.	.	S																T	T																					T	T	.	T			B		S	S			S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																																									.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.									.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																											.																														.
Query SS confidence																											.																														.
Query Sequence		P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	.	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	.	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D	H	P	K
Query Conservation																											.																														.
Alig confidence																											.														.	.	.	.	.												.
Template Conservation																																									.	.	.	.	.
Template Sequence		L	D	A	R	R	F	C	E	H	L	T	Q	D	E	F	P	A	Q	S	L	A	A	S	I	Y	V	E	T	G	V	R	S	M	E	R	G	I	K	L	.	.	.	.	.	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D	V	V	A	D	G	I	I	K	L	Y	Q	H	K	E	D	I	R	G
Template Known Secondary structure								T	T	T	S		G	G	G															S											.	.	.	.	.									T	T	S																		T	T	G	G	G
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.						.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		454	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		437	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions