Job Description P69908 Confidence 99.80% Date Thu Jan 5 12:12:17 GMT 2012 Rank 170 Aligned Residues 336 % Identity 14% Template d1sffa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.90

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A
Query Conservation
Alig confidence																.																																	.	.	.	.																											.	.	.
Template Conservation																.																																	.	.	.	.																											.	.	.
Template Sequence		H	P	K	V	V	A	A	V	E	A	Q	L	K	K	.	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	.	.	.	.	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	.	.	.
Template Known Secondary structure													T	T	T	.		S				T	T	T	S																S	S		S	S				.	.	.	.					S	S																	T				.	.	.
Template Predicted Secondary structure																.																																	.	.	.	.																											.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		149	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.																.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.
Predicted Secondary structure															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.												.	.	.	.	.
Query SS confidence															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.												.	.	.	.	.
Query Sequence		G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	.	.	D	P	K	R	M	I	E	A	C	D	E	.	.	.	.	.	N	T	I	G	V
Query Conservation															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.												.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.												.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A	I
Template Known Secondary structure		.	.	.	.	.	.	.					T	T					S	S							S	S			T	T	T	T	T	T	S					S	S								B	G	G	G	T	B																T			G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.													.	.	.	.	.	.												.	.	.	.
Template Conservation																																.	.	.	.	.	.												.	.	.	.
Template Sequence		V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	.	.	.	.	.	.	I	M	L	I	A	D	E	V	Q	S	G	.	.	.	.	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G
Template Known Secondary structure					S	B		T	T	T	T	S		B																	T	.	.	.	.	.	.								T	T	T	T	.	.	.	.	T	T	T	T	S	S	S	S	G	G	G	G	T	T	S			S						G	G	G	G	T	S
Template Predicted Secondary structure																																.	.	.	.	.	.												.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	.	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L
Query Conservation																																																																			.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	P	L	A	G	V	T	G	R	A	E	V	M	D	.	.	.	.	.	.	.	.	.	.	.	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H
Template Known Secondary structure		S													T	.	.	.	.	.	.	.	.	.	.	.	T	S		T	T	S	S			S	S	S	S																		T	T																						T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.												.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	.	.	.	.	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L
Query Conservation																																	.	.	.	.
Alig confidence								.	.	.	.	.																					.	.	.	.																			.	.	.	.	.
Template Conservation								.	.	.	.	.																																											.	.	.	.	.
Template Sequence		P	E	I	G	D	V	.	.	.	.	.	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	.	.	.	.	.	G	P	Y	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q
Template Known Secondary structure		T	T					.	.	.	.	.				T	T							B	G	G	G		T	T	S	B															T	T							.	.	.	.	.	S	T	T	S									T	T
Template Predicted Secondary structure								.	.	.	.	.																																											.	.	.	.	.
Template SS confidence
		343	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390						.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	D	Y	K	A	S	L	K	Y	L	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	E	I	I	S	Q	C	F	D	E	A	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions