Job Description P69908 Confidence 99.80% Date Thu Jan 5 12:12:17 GMT 2012 Rank 174 Aligned Residues 310 % Identity 13% Template d1s0aa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.71

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W
Query Conservation																																																																					.
Alig confidence																						.	.	.	.	.																																.	.	.	.	.							.
Template Conservation																						.	.	.	.	.																																.	.	.	.	.
Template Sequence		A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	.	.	.	.	.	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	.	.	.	.	.	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C
Template Known Secondary structure															S		T	T				.	.	.	.	.					S	S																				T						.	.	.	.	.					T	T					S	S					T	T	S
Template Predicted Secondary structure																						.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		174	.														.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.													.	.	.																				.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.													.	.	.																				.	.	.	.	.
Query Sequence		D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	R	E	I	P	M	R	P	G	Q	L	F	.	.	.	.	M	D	P	K	R	M	I	E	A	C	D	E	.	.	.	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	.	P	Q	P	L	H	D	A	L	D
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.													.	.	.																				.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.													.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D
Template Known Secondary structure			T	T	T	T	T	G	G	G	G	T	T	T	S											S	B						G	G	G	G											T	T	T								S	S				T	T	T				B		T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G
Query Conservation
Alig confidence					.	.	.	.	.	.															.	.																														.	.															.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.															.	.																														.	.															.	.	.	.	.	.	.	.	.
Template Sequence		R	E	G	.	.	.	.	.	.	I	L	L	I	A	D	E	I	A	T	G	F	G	R	.	.	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	A	L	T	G	G	T	M	T	L	.	.	S	A	T	L	T	T	R	E	V	A	E	T	I	S	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure				T	.	.	.	.	.	.								T	T	T	T	T	T	T	.	.	T	S	S	S	S	G	G	G	G	G	T				S							T	T	S	S	S	S			.	.															.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure					.	.	.	.	.	.															.	.																														.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.							240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.										.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	.	.	.	.	.	.	T	H
Template Known Secondary structure		S	T	T	S	S		S				T	T	T	T																	T																			G	G	G	G	G		T	T								T	T							.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370							.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	.	.	.	.	.	.	.	.	R	P	F	G	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D
Template Known Secondary structure			B												T	T				.	.	.	.	.	.	.	.			B	T	T								T	T																	T	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390									.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions