Return to main results Retrieve Phyre Job Id

Job DescriptionP69908
Confidence100.00%DateThu Jan 5 12:12:17 GMT 2012
Rank1Aligned Residues450
% Identity99%Templated1pmma_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINK
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Template Conservation   
   
     
     
           

                                                 
Template Sequence  KKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINK
Template Known Secondary structure 


TTTSGGGSS



SS


S


GGGS

GGGB
S

S




TTT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  NWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPV
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Template Conservation 
       
    

   
  

 
 
 
        
  
 




   
  
 
          
       
    
Template Sequence  NWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPV
Template Known Secondary structure  BTT
TTTSTT



TTS

SSST


S

SS
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  QICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI
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Template Conservation 
 
  
 
   
     

 
      
   
   
   
  

   


  
  


  
  
          

  

Template Sequence  QICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI
Template Known Secondary structure 
TT



BTTB
S



TT
BBS
TTT
BB






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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  DAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAG
Query Conservation 


 

            
     




 
 

    
 
 
 
  

   
         


       
  

   
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Template Conservation 


 

            
     



    

    
 
 
    
    
         

           

   
Template Sequence  DAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAG
Template Known Secondary structure 
TTGGGT
TT


STTSTTTTTTT


SS
SSGGGS
GGG
TT

S

S
BS
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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  QVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLR
Query Conservation    
     
  

  
          

  
   
      

         
  
 
              
   
   
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Template Conservation    
     
  

  
           
  
   
       
           

 
              
   
   
Template Sequence  QVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLR
Template Known Secondary structure  TTS


TTTBSS
TT


SS
TT
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   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   403......410.........420.........430.........440.........450..
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Query Sequence  GWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP
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Template Conservation 
  

    
        


 
    
 
 

 

 

      
   
Template Sequence  GWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP
Template Known Secondary structure  T
B



TT
TT


TT



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   403......410.........420.........430.........440.........450..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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