Job Description P69908 Confidence 99.87% Date Thu Jan 5 12:12:17 GMT 2012 Rank 126 Aligned Residues 320 % Identity 13% Template d1e5ea_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.18

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A
Query Conservation
Alig confidence																																	.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	Q	Q	G	G	N	R	F	A	G	Q	E	S	G	Y	I	Y	T	R	L	G	N	P	T	V	S	N	L	E	G	K	.	.	.	.	I	A	F	L	E	K	T	E	A	.	.	.	.	.	.	.	C	V	A	T	S	S	G	M	G	A	I	A	A	T	V	L	T	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	S	S		S			B	T	T	T												.	.	.	.						T		S		.	.	.	.	.	.	.					S	S													.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	.	.	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H
Query Conservation																			.	.	.	.
Alig confidence		.																	.	.	.	.																			.	.	.	.	.	.
Template Conservation		.																																							.	.	.	.	.	.
Template Sequence		.	L	K	A	G	D	H	L	I	S	D	E	C	L	Y	G	C	T	H	A	L	F	E	H	A	L	T	K	F	G	I	Q	V	D	F	I	N	T	A	.	.	.	.	.	.	I	P	G	E	V	K	K	H	M	K	P	N	T	K	I	V	Y	F	E	T	P	A	N	P	T	L	K	I	I	D	M	E	R	V	C
Template Known Secondary structure		.			T	T							S												T					T	T								T	T	.	.	.	.	.	.	S	T	T								T	T								S	S		T	T	T
Template Predicted Secondary structure		.																																							.	.	.	.	.	.
Template SS confidence
			98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	.	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V
Query Conservation																																																														.
Alig confidence									.	.	.	.	.																.	.	.	.	.	.	.	.																										.
Template Conservation									.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		K	D	A	H	S	Q	E	.	.	.	.	.	G	V	L	V	I	A	D	N	T	F	C	S	P	M	I	.	.	.	.	.	.	.	.	T	N	P	V	D	F	G	V	D	V	V	V	H	S	A	T	K	Y	I	N	G	H	T	D	V	V	A	G	L	I	C	G	K	A	D	L	L	Q	Q	I	R	M	V	G	I
Template Known Secondary structure						T	S	T	.	.	.	.	.	T								T	T	T		T	T	T	.	.	.	.	.	.	.	.			G	G	G	G	T		S						T	T	T	T	T	T		S	S																				T
Template Predicted Secondary structure									.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	I	T	G	S	V	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	D	A	W	L	I	T	R	G	L	S	T	L	N	I	R	M	K	A	E	S	E	N	A	M	K	V	A	E	Y	L	K	S	H	P	A	V	E	K	V	Y	Y	P	G	F	E	D	H	E	G	H	D	I	A	K	K	Q
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.												T	T																					T		T	T							T	T		S	S	S	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.														.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.																.	410	.	.	.	.	.	.						.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	L	G	G	E	A	T	.	.	.	.	.	D	I	V	V	M	R	I	M	C	R	R	G	F	E
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence																			.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation																			.	.	.
Template Sequence		M	R	M	Y	G	S	M	I	T	F	I	L	K	S	G	F	E	.	.	.	G	A	K	K	L	L	D	N	L	K	L	I	T	L	A	V	S	L	G	G	C	E	S	L	I	Q	H	P	A	S	M	T	H	A	V	V	P	K	E	E	R	E	A	A	G	I	T	D	G	M	I	R	L	S	V	G	I	E	D	A
Template Known Secondary structure			S	S			S							T	T				.	.	.								T		S	S	S			S	S				S	S	S						G	G	G	T	T	T	T	T	S								T	T			T	T								S	S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	L	I	A	D	F	K	Q	G	L	D	A	L	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions