Job Description P69908 Confidence 99.96% Date Thu Jan 5 12:12:17 GMT 2012 Rank 63 Aligned Residues 343 % Identity 15% Template d1bjna_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.30

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																							.	.	.	.											.	.	.
Query SS confidence																							.	.	.	.											.	.	.
Query Sequence		L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	.	.	.	.	N	K	N	W	I	D	K	E	E	Y	.	.	.	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L
Query Conservation																							.	.	.	.											.	.	.
Alig confidence																							.	.	.	.											.	.	.																						.	.	.
Template Conservation																																																													.	.	.
Template Sequence		N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	.	.	.	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A
Template Known Secondary structure					S	S	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		T	T	S																			T			.	.	.	T	T							S	S
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V
Query Conservation																															.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.													.																							.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		V	P	L	N	I	L	.	.	.	.	.	.	.	.	.	.	.	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	.	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	T	T									S	S											T	T	T	S										.			T	T							G	G	G					S	S		S						S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		83	.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D
Query Conservation
Alig confidence																	.	.				.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																	.	.											.
Template Conservation																	.	.				.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																	.	.											.
Template Sequence		N	E	T	I	D	G	I	A	I	D	E	T	P	D	F	.	.	G	A	D	.	.	.	.	.	.	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	.	.	.	.	.	.	.	.	.	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	N	I	G	.	.	P	A	G	L	T	I	V	I	V	R	.
Template Known Secondary structure				T	T	T	T										.	.		T	T	.	.	.	.	.	.								T	T	T	T	T	S	S			.	.	.	.	.	.	.	.	.		G	G	G		S										S	.	.	S	T	T								.
Template Predicted Secondary structure																	.	.				.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																	.	.											.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.										.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																																	.
Query SS confidence																	.	.																																	.
Query Sequence		E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	.	.	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	.	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T
Query Conservation																	.	.																																	.
Alig confidence																	.	.																																	.
Template Conservation
Template Sequence		E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A
Template Known Secondary structure		G	G	G		S				T	T	S		G	G	G								T	T	T		S	S																				T	T																								S	S					B
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y
Query Conservation
Alig confidence				.																.	.	.	.																										.	.	.	.	.
Template Conservation				.																.	.	.	.																										.	.	.	.	.
Template Sequence		K	R	.	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	.	.	.	.	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	.	.	.	.	.	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Template Known Secondary structure		G	G	.	G	B		S	S							S	S	G	G	.	.	.	.	G											T	T					B			T	T	T		S	.	.	.	.	.							T	T	S
Template Predicted Secondary structure				.																.	.	.	.																										.	.	.	.	.
Template SS confidence
		292	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.						.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions