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Job DescriptionP69908
Confidence99.68%DateThu Jan 5 12:12:17 GMT 2012
Rank208Aligned Residues366
% Identity10%Templatec3n5mD_
PDB info PDB header:transferaseChain: D: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystals structure of a bacillus anthracis aminotransferase
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60..... ....70.........80.........90.........100.........110.........120........
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Query Sequence  DGNARQNLATFCQ. . . . TWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSE
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Template Sequence  QGKRYLDGXSGLWCVNSGYGRKELAEAAYKQLQTLSYFP. . XSQSHEPAIKLAEKLNEWLGGEYV. . . . . . IFFSNSGSE
Template Known Secondary structure  T

TTT
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B

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   44.....50.........60.........70.........80.. .......90.........100...... ...110.....
 
   129130.........140.........150.........160.. .......170..... ....180.........190
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Query Sequence  ACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPV. QICWHKFARYWDV. . . . . . . . . . . . ELREIPMRPGQLFMD. . . . .
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Template Sequence  ANETAFKIARQY. . . . YAQKGEPHRYKFXSRYRGYHGNTXATXAATGQAQRRYQYEPFASGFLHVTPP. DCYRXPGIERE
Template Known Secondary structure  ....TTT
TT

TT



SSS


GGGTTTT



S



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TTTSTTTTTS
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   116...120....... ..130.........140.........150.........160.........170......... 180.........190
 
   191........200.........210......... 220.........230.........240......... 250....
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Query Sequence  . . . . . . . . . . . PKRMIEACDENTIGVVPTFGVTYTGNYEF. . . . PQPLHDALDKFQADTGIDIDMHIDAASGGF. LAPFV
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Template Sequence  NIYDVECVKEVDRVXTWELSETIAAFIXEPIITGGGILXAPQDYXKAVHETCQKHG. . . . . . ALLISDEVICGFGRTGKA
Template Known Secondary structure 
GGG

GGG
SSBTTTT
B


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   191........200.........210.........220.........230.........240...... ...250.........260....
 
   255....260.........270.........280.. .......290.........300.........310.........320.........330...
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Query Sequence  APDIVWDFRLPRVKSISASGHKFGLAPL. GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLR
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Template Sequence  FGFXNYDVK. . . PDIITXA. . KGITSAYLPLSATAVK. . . . . REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEI
Template Known Secondary structure  SGGGGTT

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   265....270... ......280 .........290...... ...300.........310.........320.........330....
 
   334.....340..... ....350.........360.........370.........380.........390.........400.........410..
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Query Sequence  LGREGYTKVQNA. SYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLG
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Template Sequence  IENENLIERSAQXGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGXT
Template Known Secondary structure  TTTTSTTSSS
TTTT

TT

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   335....340.........350.........360.........370.........380.........390.........400.........410....
 
   413......420.........430.........440........
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Query Sequence  GEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYL
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Template Sequence  TAGYN. NILTLAPPLVISSEEIAFVIGTLKTAXERI
Template Known Secondary structure  STT

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TT

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   415.... 420.........430.........440.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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