Job Description P69908 Confidence 99.97% Date Thu Jan 5 12:12:17 GMT 2012 Rank 44 Aligned Residues 363 % Identity 17% Template c3lvmB_ PDB info PDB header:transferase Chain: B: PDB Molecule:cysteine desulfurase; PDBTitle: crystal structure of e.coli iscs Resolution 2.05 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.
Query Sequence		R	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	.	.	.	.	.	.	.	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A
Query Conservation																										.	.	.	.	.	.	.
Alig confidence								.	.																	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation								.	.																																																										.	.	.	.	.
Template Sequence		Y	L	D	Y	S	A	.	.	T	T	P	V	D	P	R	V	A	E	K	M	M	Q	F	M	T	M	D	G	T	F	G	N	P	A	S	R	S	H	R	F	G	W	Q	A	E	E	A	V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	.	.	.	.	.	I	V	F	T	S	G	A	T	E	S
Template Known Secondary structure				B	T	T	T	.	.														T	T	T	S	T	T	S					T	T		T	T	S																						T			G	G	G	.	.	.	.	.					S	S
Template Predicted Secondary structure								.	.																																																										.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	.	.	.	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V
Query Conservation																																																.	.	.
Alig confidence														.	.	.	.	.	.	.	.																											.	.	.									.
Template Conservation														.	.	.	.	.	.	.	.																																						.
Template Sequence		D	N	L	A	I	K	G	A	A	N	F	Y	.	.	.	.	.	.	.	.	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	.	R	N	G	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	V	S
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	T	T	T								T	T	S														T	T										.	T	T	S													T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																																						.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W
Query Conservation
Alig confidence																											.	.	.	.	.	.																.	.	.	.	.	.	.																					.
Template Conservation																											.	.	.	.	.	.																.	.	.	.	.	.	.																					.
Template Sequence		I	M	H	V	N	N	E	I	G	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	.	.	.	.	.	.	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	.	.	.	.	.	.	.	I	D	L	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	.	P	K	G	I	G	A
Template Known Secondary structure				S	B		T	T	T		B	B														T	.	.	.	.	.	.								T	T	T	T	T	T	S		.	.	.	.	.	.	.			T	T	T	S			S						S	T	T	T	T	S	.		S	S
Template Predicted Secondary structure																											.	.	.	.	.	.																.	.	.	.	.	.	.																					.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		L	Y	V	R	.	.	.	.	.	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N
Template Known Secondary structure						.	.	.	.	.	B	T	T	B						S	S		S	S		T	T	T	T	T			S																																								T	T	S	T	T
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		216	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.										.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.
Query Sequence		C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	.	.	.	.	.	.	.	.	.	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.
Alig confidence						.													.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation						.													.	.	.	.	.
Template Sequence		G	D	L	E	.	H	G	A	P	N	I	L	N	V	S	F	N	.	.	.	.	.	Y	V	E	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S	G	S	A	L	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E	E	E	I	D	Y	T
Template Known Secondary structure		S		S	S	.	S	B		T	T							T	.	.	.	.	.	T	S									T	T	T				B														T	T								T								T	T
Template Predicted Secondary structure						.													.	.	.	.	.
Template SS confidence
		291	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	D	Y	K	A	S	L	K	Y	L	S	D	H	P	K	L	Q	G	I	A	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	L	V	R	K	S	I	G	R	L	R	D	L	S	P	L	W	E	M	Y	K	Q
Template Known Secondary structure														T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions