Job Description P69908 Confidence 99.73% Date Thu Jan 5 12:12:17 GMT 2012 Rank 198 Aligned Residues 315 % Identity 10% Template c3lv2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis 7,8-diaminopelargonic2 acid synthase in complex with substrate analog sinefungin Resolution 2.18 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W
Query Conservation																																																																					.
Alig confidence																						.	.	.	.	.																						.	.	.	.																		.
Template Conservation																						.	.	.	.	.																						.	.	.	.
Template Sequence		E	P	A	A	R	L	A	K	L	L	V	D	I	T	P	A	G	L	D	T	.	.	.	.	.	V	F	F	S	D	S	G	S	V	S	V	E	V	A	A	K	M	A	L	Q	Y	.	.	.	.	W	R	G	R	G	L	P	G	K	R	R	L	M	T	W	R	G	G	Y	H	G	D	T	F	L	A	M	S	I	C
Template Known Secondary structure															S	S	T	T				.	.	.	.	.					S	S																.	.	.	.			T	T	T		T	T								T	T					S	S					T	T	S
Template Predicted Secondary structure																						.	.	.	.	.																						.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		174	.	.															.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.											.											.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.											.											.	.	.	.
Query Sequence		D	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	.	.	.	E	N	T	I	G	V	V	P	T	F	.	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.											.											.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.											.											.	.	.	.
Template Conservation
Template Sequence		D	P	H	G	G	M	H	S	L	W	T	D	V	L	A	A	Q	V	F	A	P	Q	V	P	R	D	Y	D	P	A	Y	S	A	A	F	E	A	Q	L	A	Q	H	A	G	E	L	A	A	V	V	V	E	P	V	V	Q	G	A	G	G	M	R	F	H	D	P	R	Y	L	H	D	L	R	D	I	C	R	R	Y	E
Template Known Secondary structure			T	T	T	T	T	G	G	G	T		S	S	S											S	S																	G	G	G								S	S				T	T	T						T													T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G
Query Conservation
Alig confidence		.	.	.	.	.	.															.	.																					.	.																													.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.															.	.																					.	.																													.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	V	L	L	I	F	D	E	I	A	T	G	F	G	R	.	.	T	G	A	L	F	A	A	D	H	A	G	V	S	P	D	I	M	C	V	G	.	.	K	A	L	T	G	G	Y	L	S	L	A	A	T	L	C	T	A	D	V	A	H	T	I	S	A	G	A	A	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.								T	T	T	T	T	T	T	.	.	T	S	S	S	S	G	G	G	G	T	T				S						.	.	G	G	G	G	T	T	S	S																		S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.															.	.																					.	.																													.	.	.	.	.	.	.	.
Template SS confidence
								249	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T
Query Conservation
Alig confidence		.	.																																																																				.	.	.	.	.	.
Template Conservation		.	.																																																																				.	.	.	.	.	.
Template Sequence		.	.	L	M	R	G	P	T	F	M	A	N	P	L	A	C	A	V	S	V	A	S	V	E	L	L	L	G	Q	D	W	R	T	R	I	T	E	L	A	A	G	L	T	A	G	L	D	T	A	R	A	L	P	A	V	T	D	V	R	V	C	G	A	I	G	V	I	E	C	.	.	.	.	.	.	D	R	P	V	D
Template Known Secondary structure		.	.			S			T	T	T	T																	T	S																		G	G	G	G	G	S	T	T								S	S							.	.	.	.	.	.	S	S
Template Predicted Secondary structure		.	.																																																																				.	.	.	.	.	.
Template SS confidence
				313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.							380	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D	H	P
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		L	A	V	A	T	P	A	A	L	D	R	G	V	W	L	R	P	F	R	.	.	.	.	.	.	.	.	N	L	V	Y	A	M	P	P	Y	I	C	T	P	A	E	I	T	Q	I	T	S	A	M	V	E	V	A	R	L	V	G	S	L	P
Template Known Secondary structure											T	T	T						B	T	.	.	.	.	.	.	.	.	T								T	T																						S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.									.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions