Job Description P69908 Confidence 99.88% Date Thu Jan 5 12:12:17 GMT 2012 Rank 121 Aligned Residues 339 % Identity 11% Template c3l8aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative aminotransferase, probable beta-cystathionase; PDBTitle: crystal structure of metc from streptococcus mutans Resolution 1.54 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A
Query Conservation
Alig confidence																						.	.																												.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.																												.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	P	E	I	K	E	A	I	I	N	Y	G	R	E	H	I	F	G	Y	.	.	N	Y	F	N	D	D	L	Y	Q	A	V	I	D	W	E	R	K	E	H	D	Y	A	V	V	K	E	D	.	.	.	I	L	F	I	D	G	V	V	P	A	I	S	I	A	L	Q	A	F	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			S	S		.	.																									G	G	G	.	.	.					S														.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.																												.	.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.
Predicted Secondary structure																																						.	.																.																						.	.	.
Query SS confidence																																						.	.																.																						.	.	.
Query Sequence		A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	.	.	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	.	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	P	Q
Query Conservation																																						.	.																.																						.	.	.
Alig confidence		.	.																																			.	.																.																						.	.	.
Template Conservation		.	.
Template Sequence		.	.	S	E	K	G	D	A	V	L	I	N	S	P	V	Y	Y	P	F	A	R	T	I	R	L	N	D	H	R	L	V	E	N	S	L	Q	I	I	N	G	R	F	E	I	D	F	E	Q	L	E	K	D	I	I	D	N	N	V	K	I	Y	L	L	C	S	P	H	N	P	G	G	R	V	W	D	N	D	D	L	I
Template Known Secondary structure		.	.	S		T									S												T	T												T	T																T	T								S	S	B	T	T	T	T	B
Template Predicted Secondary structure		.	.
Template SS confidence
				106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	.	.	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L
Query Conservation																																.	.
Alig confidence												.	.	.	.	.	.															.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		K	I	A	E	L	C	K	K	H	G	.	.	.	.	.	.	V	I	L	V	S	D	E	I	H	Q	D	L	A	L	F	G	N	T	H	H	S	L	N	T	L	D	A	S	Y	K	D	F	T	I	I	L	S	S	A	T	K	T	F	N	I	A	G	T	K	N	S	F	A	I	I	Q	N	E	S	L	R	R	K	F
Template Known Secondary structure											T	.	.	.	.	.	.								T	T	T	T		B		T	T						G	G	G	S		T	T	G	G	G	T							S					T		G	G	G									S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Template Sequence		Q	Y	R	Q	L	.	.	.	.	.	.	.	.	.	A	N	N	Q	H	E	V	P	T	V	G	M	I	A	T	Q	A	A	F	Q	Y	G	K	P	W	L	E	E	L	K	T	V	I	E	G	N	I	K	L	V	I	K	E	L	E	A	K	T	K	I	K	V	M	E	P	E	G	T	Y	.	.	.	.	.	.	.
Template Known Secondary structure							.	.	.	.	.	.	.	.	.		T	T		S																																											S	S							S	B	S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.										.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		L	V	W	L	D	F	S	A	Y	A	I	A	Q	P	Q	L	S	E	K	L	Q	N	E	A	K	V	V	L	N	D	G	A	H	F	G	K	E	G	K	Y	F	A	R	L	N	V	A	.	.	T	P	K	N	T	V	Q	E	A	L	S	R	I	I	S	V	F	G	K
Template Known Secondary structure								G	G	G	T			T	T									T	S							G	G	G	G		G	G	G	T	T								.	.	S																S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions