Job Description P69908 Confidence 99.77% Date Thu Jan 5 12:12:17 GMT 2012 Rank 188 Aligned Residues 350 % Identity 11% Template c3l44A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase 1; PDBTitle: crystal structure of bacillus anthracis heml-1, glutamate semialdehyde2 aminotransferase Resolution 2.05 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		D	G	N	A	R	Q	N	L	A	T	F	C	Q	T	W	.	.	.	.	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																															.	.	.	.													.	.	.	.	.	.
Template Conservation																																																			.	.	.	.													.	.	.	.	.	.
Template Sequence		D	G	N	K	Y	I	D	Y	L	A	A	Y	G	P	I	I	T	G	H	A	H	P	H	I	T	K	A	I	T	T	A	A	E	N	G	V	L	Y	G	T	P	T	A	L	E	V	K	F	A	.	.	.	.	K	X	L	K	E	A	X	P	A	L	D	K	.	.	.	.	.	.	V	R	F	V	N	S	G	T	E
Template Known Secondary structure		T									G	G	G	T	T		S	S		B	T																S			S	S										.	.	.	.								T	T		S		.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																																			.	.	.	.													.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.													.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	.	.	.	.	.	.	.	.	.	.	.	.	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template Sequence		A	V	X	T	T	I	R	V	A	R	A	Y	.	.	.	.	.	.	.	.	.	T	G	R	T	K	I	X	K	F	A	G	C	Y	H	G	H	S	D	L	V	L	V	A	L	G	T	P	D	S	A	G	V	P	Q	S	I	A	Q	E	V	I	T	V	P	F	N	.	.	.	.	.	.	N	V	E	T	L	K	E
Template Known Secondary structure														.	.	.	.	.	.	.	.	.										T	T					S	S	G	G	G	G	B					B	S	S	T	T							T	T						T	T	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.
		197	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.																					.	.	.	.
Query SS confidence					.	.	.																					.	.	.	.
Query Sequence		A	C	D	.	.	.	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S
Query Conservation					.	.	.																					.	.	.	.
Alig confidence					.	.	.																					.	.	.	.													.	.	.	.	.	.																											.	.	.
Template Conservation																																												.	.	.	.	.	.																											.	.	.
Template Sequence		A	L	D	K	W	G	H	E	V	A	A	I	L	V	E	P	I	V	G	N	F	G	I	V	E	P	K	P	G	F	L	E	K	V	N	E	L	V	H	E	A	G	.	.	.	.	.	.	A	L	V	I	Y	D	E	V	I	T	A	F	R	F	X	Y	G	G	A	Q	D	L	L	G	V	T	.	.	.	P	D	L
Template Known Secondary structure							G	G	G								S	S	B		T	T	S		B				T	T											T	T	T	.	.	.	.	.	.								T	T	T	T	T	T	S	S	S	S							T			.	.	.		S
Template Predicted Secondary structure																																												.	.	.	.	.	.																											.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V
Query Conservation
Alig confidence					.	.						.											.	.										.	.	.	.	.
Template Conservation					.	.						.											.	.										.	.	.	.	.
Template Sequence		T	A	L	.	.	G	V	I	G	G	.	G	L	P	I	G	A	Y	G	G	K	.	.	K	E	I	X	E	Q	V	A	P	.	.	.	.	.	L	G	P	A	Y	Q	A	G	T	X	A	G	N	P	A	S	X	A	S	G	I	A	C	L	E	V	L	Q	Q	E	G	L	Y	E	K	L	D	E	L	G	A	T	L
Template Known Secondary structure					.	.			T	T	T	.	T	S	S								.	.					T	T	B	T	T	.	.	.	.	.	T	S	S	B					T	T	T	T																T	S	T	T
Template Predicted Secondary structure					.	.						.											.	.										.	.	.	.	.
Template SS confidence
		266	.	.			.	270	.	.	.		.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.						.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F
Query Conservation
Alig confidence																			.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		E	K	G	I	L	E	Q	A	A	K	H	N	I	D	I	T	L	.	.	.	.	.	N	R	L	K	G	A	L	T	V	Y	F	T	T	N	T	I	E	D	Y	D	A	A	Q	D	T	D	G	E	X	F	G	K	F	F	K	L	X	L	Q	E	G	V	N	L	A	P	S	K	Y	E	A	W	F	L	T	T	E	H
Template Known Secondary structure												T	T						.	.	.	.	.				T	T							S	S	S				S							S															T	T					S	S	T	T							T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.						.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	E	D	I	E	Y	T	I	E	A	V	G	R	A	F	A	A	L	A	D	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions