Job Description P69908 Confidence 82.99% Date Thu Jan 5 12:12:17 GMT 2012 Rank 236 Aligned Residues 49 % Identity 14% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G
Query Conservation
Alig confidence																				.	.	.	.	.																						.	.	.	.
Template Conservation																				.	.	.	.	.																						.	.	.	.
Template Sequence		N	Q	K	D	M	E	K	I	L	E	L	D	L	T	Y	M	V	M	.	.	.	.	.	L	E	T	H	V	A	Q	L	K	A	L	V	K	Y	A	Q	A	G	G	K	K	.	.	.	.	V	L	L	H	A	D	L	V	N	G
Template Known Secondary structure		S	S							T	T	S	S							.	.	.	.	.		S			T	T	T											T	T			.	.	.	.					G	G	G			T
Template Predicted Secondary structure																				.	.	.	.	.																						.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions