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Job DescriptionP69908
Confidence100.00%DateThu Jan 5 12:12:17 GMT 2012
Rank7Aligned Residues406
% Identity16%Templatec3k40B_
PDB info PDB header:lyaseChain: B: PDB Molecule:aromatic-l-amino-acid decarboxylase; PDBTitle: crystal structure of drosophila 3,4-dihydroxyphenylalanine2 decarboxylase
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30 .........40.........50 .........60.........70..
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Query Sequence  KLLTDFRSELLDSRFGAKAISTIAESK. . . . . . . RFPLHEMRDDVAFQIINDEL. . . . YLDGNARQNLATFCQTWDDENV
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Template Sequence  KTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAIV
Template Known Secondary structure  TGGGS
SS
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TT
SGGGS
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TGGG


TT
TTB

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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   73......80.........90.........100.........110.... .....120.........130.........140........
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Query Sequence  HKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPK. . . . NGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAA
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Template Sequence  ADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKEL
Template Known Secondary structure 


SSS



TT

GGG
GGGTSS
S
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   149150. ........160. ........170.........180.........190.........200. ........210.....
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Query Sequence  GKP. . . . . . TDKPNLVCGP. VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDEN. . . . . . TIGVVPTFGVTYTG
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Template Sequence  HPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSEN. . HRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSC
Template Known Secondary structure 
TTS
TTTTS
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BT..TB

TTT
BS
TTT
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   171........180.........190.........200.........210... ......220.........230.........240........
 
   216...220.........230.........240.........250.........260.........270.........280.........290.....
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Query Sequence  NYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEAL
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Template Sequence  AFDYLDECGPVGNKHN. . . . . . LWIHVDAAYAGSAFICPEYRHLMK. GIESADSFNFNPHWML. VNFDCSAMWLKD. . . .
Template Known Secondary structure 
B

TT......

TTGGGGGGSGGGGGGGT.TGGG
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   249250.........260.... .....270.........280........ .290.........300.... .....310......
 
   296...300.........310.........320.........330.........340.........350.........360.........370.....
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Query Sequence  PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGI
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Template Sequence  . . . . . . . . . . . . . . . . PSWVPLGR. RFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAA. . . . EINM
Template Known Secondary structure  ................TT




G.GGTSTTSS....

BT
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   318.320..... ....330.........340.........350.........360.........370.. ....
 
   376...380.........390.........400.........410.........420..... ....430.........440.........450
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Query Sequence  PAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMC. RRGFEMDFAELLLEDYKASLKYLSD
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Template Sequence  GLVCFRLKGSNERN. . . EALLKRINGRGHIHLV. . . PAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ
Template Known Secondary structure  TSS
...TS
B
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TT

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   404.....410....... ..420.........430... ......440.........450.........460.........470...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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