Job Description P69908 Confidence 99.62% Date Thu Jan 5 12:12:17 GMT 2012 Rank 219 Aligned Residues 238 % Identity 13% Template c3gwpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carbon-sulfur lyase involved in aluminum resistance; PDBTitle: crystal structure of carbon-sulfur lyase involved in aluminum2 resistance (yp_878183.1) from clostridium novyi nt at 2.90 a3 resolution Resolution 2.90 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.													.
Predicted Secondary structure																							.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	.	.	.	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	.	.	.	.	.	.	.	.	.	.	W
Query Conservation																							.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.				.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	Y	A	R	V	F	N	T	E	S	.	.	.	.	.	.	.	A	L	V	R	P	H	F	V	N	G	T	H	A	L	G	A	A	L	F	G	N	.	.	.	.	.	.	.	.	.	.	.	.	L	R	P	G	N	T	X	L	S	V	C	G	E	P	Y	D	T	L	H	D	V	I	G	I	T	E	N	S	N
Template Known Secondary structure								T	T		S		.	.	.	.	.	.	.				B	T	T			S													.	.	.	.	.	.	.	.	.	.	.	.			T	T						S	S	S	S			T	T						T	S	S				T
Template Predicted Secondary structure													.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110													.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	.	.	.	.	.	.	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M
Query Conservation																																													.	.	.	.	.	.
Alig confidence																				.																									.	.	.	.	.	.																							.	.	.	.
Template Conservation																				.																																																					.	.	.	.
Template Sequence		X	G	S	L	K	E	F	G	I	N	Y	K	Q	V	D	L	K	E	.	D	G	K	P	N	L	E	E	I	E	K	V	L	K	E	D	E	S	I	T	L	V	H	I	Q	R	S	T	G	Y	G	W	R	R	A	L	L	I	E	D	I	K	S	I	V	D	C	V	K	N	I	R	.	.	.	.	K	D	I	I	C
Template Known Secondary structure		T			T	G	G	G	T								B		T	.	T	S	S	B													T	T									S		T	T		S	S																				.	.	.	.	T	T	S
Template Predicted Secondary structure																				.																																																					.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	.	.	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S
Query Conservation																																										.	.
Alig confidence										.	.	.	.												.	.	.															.	.				.																													.
Template Conservation										.	.	.	.												.	.	.																				.																													.
Template Sequence		F	V	D	N	C	Y	G	E	.	.	.	.	F	X	D	T	K	E	P	T	D	V	G	.	.	.	A	D	L	I	A	G	S	L	I	N	I	G	G	G	I	A	P	T	G	.	G	Y	L	A	G	T	K	D	C	I	E	K	T	S	Y	R	L	T	V	P	G	I	G	G	E	C	G	S	.	T	F	G	V	V
Template Known Secondary structure						T	T		T	.	.	.	.	T	S	S	S	S		G	G	G	G	T	.	.	.		S									T	T	T	T	T			S		.																		S		T	T	T	G	G	G	S			.		T	T
Template Predicted Secondary structure										.	.	.	.												.	.	.																				.																													.
Template SS confidence
		215	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D
Query Conservation
Alig confidence									.	.						.	.	.	.	.	.	.	.	.																					.
Template Conservation									.	.						.	.	.	.	.	.	.	.	.																					.
Template Sequence		R	S	X	Y	Q	G	L	.	.	F	L	A	P	H	.	.	.	.	.	.	.	.	.	I	S	X	E	A	L	K	G	A	I	L	C	S	R	I	X	E	L	A	G	.	F	E	V	X	P	K	Y	D	E	K	R	S	D	I	I	Q	S	I	K	F	N	D
Template Known Secondary structure									.	.						.	.	.	.	.	.	.	.	.																			T	T	.					S		T	T	S			S	S	S							S	S
Template Predicted Secondary structure									.	.						.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		287	.	.	290	.	.	.			.	.	.	.	.										.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions