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Job DescriptionP69908
Confidence99.82%DateThu Jan 5 12:12:17 GMT 2012
Rank161Aligned Residues323
% Identity15%Templatec3fkdC_
PDB info PDB header:lyaseChain: C: PDB Molecule:l-threonine-o-3-phosphate decarboxylase; PDBTitle: the crystal structure of l-threonine-o-3-phosphate2 decarboxylase from porphyromonas gingivalis
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  QNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM
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Template Sequence  VNFSTTVWTDGDDHLEKHLVENLNCIRHYPEPDA. . . . . . GTLRQXLAKRNSVDNNA. . . . . ILVTNGPTAAFYQIAQAF
Template Known Secondary structure 
S

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TGGGGGS


TT
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GGG.....ST
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   18.20.........30.........40.........50. ........60........ .70.........80......
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  KWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY
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Template Sequence  RGSR. . . . . . . . . . . . . . SLIAIPSFAEYEDACRXYEHEVCFYPSNEDI. . . . . . . . GEADFSNXDFCWLCNPNNPDGRL
Template Known Secondary structure  TT
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TT
TTS
G........GGS

TT
SSS
TTT


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   88.90. ........100.........110.........120.. .......130.........140.....
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  EFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQ
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Template Sequence  LQRTEILRLLNDHP. . . . . DTTFVLDQSYVSFT. . TEEVIRPADIKGRKNLVXVYSFSHAYGIPGLRIGYIVANKDFXKR
Template Known Secondary structure 


T.....TS
TTGGG
..SS



GGGGTT
SSSTTTSS
GGG


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   146...150......... 160.........170... ......180.........190.........200.........210........
 
   298.300.........310.........320.........330.........340.........350.........360.........370.......
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Query Sequence  ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPA
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Template Sequence  VAAFSTPWA. . . . . . . . . . . . . . VNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVH. . . . . PSGTTF
Template Known Secondary structure  TT

TT
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STT
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   219220....... ..230.........240.........250.........260.........270... ......
 
   378.380.........390.........400.........410.........420.........430.........440.......
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Query Sequence  VCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKY
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Template Sequence  FLLRLKK. . . . GTAAELKKYXLEEYNXLIRDASNFRGLDES. YVRITTQ. . . RPAQNQLFIKALETFLEK
Template Known Secondary structure  SS....S
TT


TTSTT

TT.

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   280...... ...290.........300.........310...... ...320... ......330.........340.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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