Job Description P69908 Confidence 99.52% Date Thu Jan 5 12:12:17 GMT 2012 Rank 229 Aligned Residues 327 % Identity 14% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L
Query Conservation																																																																	.
Alig confidence																		.	.	.	.	.																																											.
Template Conservation																		.	.	.	.	.
Template Sequence		S	A	R	A	L	F	A	G	Y	L	D	V	K	A	E	N	.	.	.	.	.	V	L	V	W	N	N	S	S	L	E	L	Q	G	L	V	L	T	F	A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	P	K	X	I	V	T	V	P	G	Y	D	R	H	F	L	L	L	Q	T	L	G	F	E	L
Template Known Secondary structure											T	T	S		G	G	G	.	.	.	.	.					S	S																T			T	T		S	S		G	G	G	G									S													T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																										.	.	.																										.	.	.	.
Query SS confidence																										.	.	.																										.	.	.	.
Query Sequence		R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	.	.	.	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	.	.	.	.	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L
Query Conservation																										.	.	.																										.	.	.	.
Alig confidence											.	.														.	.	.																										.	.	.	.						.	.	.	.	.	.
Template Conservation											.	.																																																			.	.	.	.	.	.
Template Sequence		L	T	V	D	X	Q	S	D	G	.	.	P	D	V	D	A	V	E	R	L	A	G	T	D	P	S	V	K	G	I	L	F	V	P	T	Y	S	N	P	G	G	E	T	I	S	L	E	K	A	R	R	L	A	G	L	Q	A	A	A	P	D	.	.	.	.	.	.	F	T	I	F	A	D	D	A	Y	R	V	H	H
Template Known Secondary structure								T	T		.	.												S		T	T								S	S	S		T	T	T														T				S	S	T	T	.	.	.	.	.	.								T	T	S	S		B
Template Predicted Secondary structure											.	.																																																			.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		A	P	F	V	A	P	D	I	V	W	D	F	.	.	.	.	.	.	.	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.
Template Sequence		L	V	E	E	D	R	A	E	P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	A	G	A	G	L	G	F	V	A	S	S	E	D	N	I	R	W	L	S	K	Y	L	G	A	Q	.	.	.	.	.	.	.	.	.	S	I	G	P	N	K	V	E	Q	A
Template Known Secondary structure				S	S	S															T		T	T	S							S	T	T	T	S		S	S	S	S																					S	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.	.	.	290
		324	.	.	.	.	.	330						.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		V	I	A	Q	Y	Y	E	.	.	.	.	.	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																																																.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.
Template Sequence		R	H	V	K	F	L	T	E	Y	P	G	G	L	E	G	L	X	R	D	H	A	A	I	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	E	Y	A	T	W	T	L	P	K	G	G	Y	F	I	S	L	.	.	.	.	.	.	.	.	D	T	A	E	P	V	A	D	R	V	V	K	L
Template Known Secondary structure										S	T	T																													T	T	T	T	S	S							S	B	S	S					.	.	.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.									350	.	.	.	.	.	.	.	.	.	360	.	.
		399	400	.	.	.	.	.	.	.			.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure											.	.							.
Query SS confidence											.	.							.
Query Sequence		L	R	L	R	G	W	Q	V	P	.	.	A	F	T	L	G	G	.	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D	H	P	K	L	Q	G
Query Conservation											.	.							.
Alig confidence											.	.							.																.
Template Conservation																																			.
Template Sequence		A	E	A	A	G	V	S	L	T	P	A	G	A	T	Y	P	A	G	Q	D	P	H	N	R	N	L	R	L	A	P	T	R	P	.	P	V	E	E	V	R	T	A	X	Q	V	V	A	A	C	I	R	L	A	T	E	E	Y	R	A	G	H
Template Known Secondary structure					T	T						T	T	T	T	S	S	T	T			S	S	S								S	S	S	.																									T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions