Job Description P69908 Confidence 99.89% Date Thu Jan 5 12:12:17 GMT 2012 Rank 110 Aligned Residues 294 % Identity 15% Template c3e6gA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cystathionine gamma-lyase-like protein; PDBTitle: crystal structure of xometc, a cystathionine c-lyase-like2 protein from xanthomonas oryzae pv.oryzae Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A
Query Conservation
Alig confidence											.	.	.	.										.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.										.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	R	F	A	Y	E	R	C	.	.	.	.	V	A	A	L	E	G	G	T	R	.	.	.	.	.	.	.	A	F	A	F	A	S	G	M	A	A	T	S	T	V	M	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	G	S	H	V	V	A	M	D	D	L	Y	G	G	T	F	R	L	F
Template Known Secondary structure											.	.	.	.						T		S		.	.	.	.	.	.	.					S	S										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T							S	S
Template Predicted Secondary structure											.	.	.	.										.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.														.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L
Query Conservation
Alig confidence																.																																															.	.	.	.	.	.
Template Conservation																.																																															.	.	.	.	.	.
Template Sequence		E	R	V	R	R	R	T	A	G	L	D	F	S	F	.	V	D	L	T	D	P	A	A	F	K	A	A	I	R	A	D	T	K	M	V	W	I	E	T	P	T	N	P	M	L	K	L	V	D	I	A	A	I	A	V	I	A	R	K	H	G	.	.	.	.	.	.	L	L	T	V	V	D	N	T	F	A	S	P	M
Template Known Secondary structure																.			T	T											T	T								S	S		T	T	T																T	T	.	.	.	.	.	.								S	S	S		T	T
Template Predicted Secondary structure																.																																															.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	.	.	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y
Query Conservation																																			.	.
Alig confidence			.	.	.	.	.	.	.	.																									.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	Q	R	P	L	S	L	G	A	D	L	V	V	H	S	A	T	K	Y	L	N	G	H	S	D	M	V	G	G	I	A	V	V	G	D	N	A	E	L	A	E	Q	M	A	F	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	N	S	I	G	G	V	Q	G	P	F	D	S	F
Template Known Secondary structure		T	.	.	.	.	.	.	.	.			G	G	G	G	T		S						T	T	T	T	T	T		S	S	S										S											.	.	.	.	.	.	.	.	.	.	.	.								B
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		193									.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.													.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370														.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation						.	.																																																																			.	.	.
Template Sequence		L	A	L	R	.	.	G	L	K	T	L	P	L	R	M	R	A	H	C	E	N	A	L	A	L	A	Q	W	L	E	T	H	P	A	I	E	K	V	I	Y	P	G	L	A	S	H	P	Q	H	V	L	A	K	R	Q	M	S	G	F	G	G	I	V	S	I	V	L	K	G	G	F	D	.	.	.	A	A	K	R	F
Template Known Secondary structure						.	.			T	T																					T		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T				.	.	.
Template Predicted Secondary structure						.	.																																																																			.	.	.
Template SS confidence
		253	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.
		396	.	.	.	400	.	.	.																					.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	R	L	R	L	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		C	E	K	T	E	L	F	T	L	A	E	S	L	G	G	V	E	S	L	V	N	H	P	A	V	M	T	H	A	S	I	P	V	A	R	R	E	Q	L	G	I	S	D	A	L	V	R	L	S	V	G	.	.	.	.	I	E	D	L	G	D	L	R	G	D	L	E	R	A
Template Known Secondary structure						S	S	S				S					S	S						T	T	T	T	T	T		S	S			T	T	T	T	T	S	S			S	S								.	.	.	.	S	S										T	T
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.					.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions