Job Description P69908 Confidence 99.89% Date Thu Jan 5 12:12:17 GMT 2012 Rank 116 Aligned Residues 344 % Identity 13% Template c3b46B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae Resolution 2.00 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	.	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E
Query Conservation																					.
Alig confidence																					.																															.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		P	P	Q	F	A	I	K	E	A	Q	K	A	L	D	I	P	M	V	N	Q	Y	S	P	T	R	G	R	P	S	L	I	N	S	L	I	K	L	Y	S	P	I	Y	N	T	E	L	K	A	E	N	.	.	.	V	T	V	T	T	G	A	N	E	G	I	L	S	C	L	M	G	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	S	G	G	G	G	S				T	T																	T	T	S				G	G	G	.	.	.					S														.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.												.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	.	.	.	.	.	.	.	.	.	.	.	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	N	A	G	D	E	V	I	V	F	E	P	F	F	D	Q	Y	I	P	N	I	E	L	C	G	G	K	V	V	Y	V	P	I	N	P	P	K	E	L	D	Q	R	N	T	R	G	E	E	W	T	I	D	F	E	Q	F	E	K	A	I	T	S	K	T	K	A	V	I	I	N	T	P	H	N	P	I	G
Template Known Secondary structure		.	.	.			T	T								S			T	T								T	T												T	T	T	T	T	S		B		G	G	G	S										T			T	T								S	S		T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		216	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure						.	.	.																																					.
Query SS confidence						.	.	.																																					.
Query Sequence		N	Y	E	F	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	.	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D
Query Conservation						.	.	.																																					.
Alig confidence						.	.	.													.	.	.	.	.	.																			.
Template Conservation																					.	.	.	.	.	.
Template Sequence		K	V	F	T	R	E	E	L	T	T	L	G	N	I	C	V	K	H	N	.	.	.	.	.	.	V	V	I	I	S	D	E	V	Y	E	H	L	Y	F	T	D	S	F	T	R	I	A	T	L	S	P	E	I	G	Q	L	T	L	T	V	G	S	A	G	S	F	A	A	T	G	W	R	I	G	W	V	L	S	L	N
Template Known Secondary structure																				T	.	.	.	.	.	.								T	T	T	T		B		S	S					G	G	G	S						T	T											S		T	T	S								S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.							.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.																																																	.
Template Conservation															.	.	.	.	.	.	.	.	.																																																	.
Template Sequence		A	E	L	L	S	Y	A	A	K	A	H	T	R	.	.	.	.	.	.	.	.	.	I	C	F	A	S	P	S	P	L	Q	E	A	C	A	N	S	I	N	D	A	L	K	I	G	Y	F	E	K	M	R	Q	E	Y	I	N	K	F	K	I	F	T	S	I	F	D	E	L	G	.	L	P	Y	T	A	P	E	G	T
Template Known Secondary structure															.	.	.	.	.	.	.	.	.		T	S	S																				T																								T	.							S	B	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																																	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300										.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390													.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.					.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	.	.	.	.	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.																				.	.
Template Conservation		.	.	.	.																																																																					.	.
Template Sequence		.	.	.	.	Y	F	V	L	V	D	F	S	K	V	K	I	P	E	D	Y	P	Y	P	E	E	I	L	N	K	G	K	D	F	R	I	S	H	W	L	I	N	E	L	G	V	V	A	I	P	P	T	E	F	Y	I	K	E	H	E	K	A	A	E	N	L	L	R	F	A	V	C	K	.	.	D	D	A	Y	L	E
Template Known Secondary structure		.	.	.	.	S							T	T	S				T	T					G	G	G	T	S	S																			B		G	G	G	G	S		G	G	G	G	G	G	G	T	T								S	.	.
Template Predicted Secondary structure		.	.	.	.																																																																					.	.
Template SS confidence
						358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.			.	.	.	.	430	.
		436	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	E	D	Y	K	A	S	L	K	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	V	E	R	L	K	L	L	K	D	Y	L
Template Known Secondary structure								G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions