Job Description P69908 Confidence 99.88% Date Thu Jan 5 12:12:17 GMT 2012 Rank 119 Aligned Residues 363 % Identity 10% Template c3a8uX_ PDB info PDB header:transferase Chain: X: PDB Molecule:omega-amino acid--pyruvate aminotransferase; PDBTitle: crystal structure of omega-amino acid:pyruvate aminotransferase Resolution 1.40 Å

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		53	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		D	G	N	A	R	Q	N	L	A	T	F	.	.	.	.	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																				.																																.	.	.	.	.
Template Conservation																																				.																																.	.	.	.	.
Template Sequence		K	G	R	K	V	Y	D	S	L	S	G	L	W	T	C	G	A	G	H	T	R	K	E	I	Q	E	A	V	A	K	Q	L	S	T	.	L	D	Y	S	P	G	F	Q	Y	G	H	P	L	S	F	Q	L	A	E	K	I	T	D	L	T	P	G	N	L	N	H	.	.	.	.	.	V	F	F	T	D	S	G	S	E
Template Known Secondary structure		T							T	T					T		T	T		B	S												T	T	T	.		S				S	S	S															T	T	S	S	T	T				.	.	.	.	.					S	S
Template Predicted Secondary structure																																				.																																.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.													.	.	.	.	180	.													.	.
Predicted Secondary structure																																			.															.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.															.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	.	.	.	.	.	.	.	.	.	.	.	.	E	L	R	E	I	P	.	.	.	.	.	.	.	.	.	.	.	.	M	R
Query Conservation																																			.															.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																	.															.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		C	A	L	T	A	V	K	M	V	R	A	Y	W	.	.	.	.	R	L	K	G	Q	A	T	K	T	K	M	I	G	R	A	R	G	Y	H	G	V	N	I	A	G	T	S	L	G	G	V	N	G	N	R	K	L	F	G	Q	P	M	Q	D	V	D	H	L	P	H	T	L	L	A	S	N	A	Y	S	R	G	M	P
Template Known Secondary structure															.	.	.	.			T	T		T	T								T	T					S	S														T	T	T				S		S										G	G	G	T	T		S	S	S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																					.	.	.	.
Query SS confidence																		.	.	.	.																					.	.	.	.
Query Sequence		P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	.	.	.	.	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A
Query Conservation																		.	.	.	.																					.	.	.	.
Alig confidence																		.	.	.	.																					.	.	.	.													.	.	.	.	.	.															.	.
Template Conservation																																																										.	.	.	.	.	.															.	.
Template Sequence		K	E	G	G	I	A	L	A	D	E	L	L	K	L	I	E	L	H	D	A	S	N	I	A	A	V	F	V	E	P	L	A	G	S	A	G	V	L	V	P	P	E	G	Y	L	K	R	N	R	E	I	C	N	Q	H	N	.	.	.	.	.	.	I	L	L	V	F	D	E	V	I	T	G	F	G	R	.	.	T	G
Template Known Secondary structure		S	S	S																	G	G	G								S	S	B	T	T	T	T		B				T	T													T	.	.	.	.	.	.								T	T	T	T	T	T	T	.	.	T	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.															.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.							.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G
Query Conservation
Alig confidence																										.											.	.	.	.	.
Template Conservation																										.											.	.	.	.	.
Template Sequence		S	M	F	G	A	D	S	F	G	V	T	P	D	L	M	C	I	A	K	Q	V	T	N	G	.	A	I	P	M	G	A	V	I	A	S	.	.	.	.	.	T	E	I	Y	Q	T	F	M	N	Q	P	T	P	E	Y	A	V	E	F	P	H	G	Y	T	Y	S	A	H	P	V	A	C	A	A	G	L	A	A	L	C
Template Known Secondary structure		S	S	S						T				S						G	G	G	G	T	T	.	S	S									.	.	.	.	.									T		S	S		T	T	S		S	S					T	T	T	T
Template Predicted Secondary structure																										.											.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.						.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A
Query Conservation
Alig confidence																																															.																										.	.	.	.	.	.	.	.
Template Conservation																																															.																										.	.	.	.	.	.	.	.
Template Sequence		L	L	Q	K	E	N	L	V	Q	S	V	A	E	V	A	P	H	F	E	K	A	L	H	G	I	K	G	A	K	N	V	I	D	I	R	N	F	G	L	A	G	A	I	Q	I	.	A	P	R	D	G	D	A	I	V	R	P	F	E	A	G	M	A	L	W	K	A	G	F	Y	V	.	.	.	.	.	.	.	.	R
Template Known Secondary structure						T	T																		T	T	T	T	S	T	T								T	T							.			B	T	T	B	S	S														T				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.																										.	.	.	.	.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.									.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	G	D	T	L	Q	F	G	P	T	F	N	S	K	P	Q	D	L	D	R	L	F	D	A	V	G	E	V	L	N	K	L
Template Known Secondary structure				T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

No model constructed - rank, confidence too low