Job Description P69908 Confidence 99.71% Date Thu Jan 5 12:12:17 GMT 2012 Rank 204 Aligned Residues 343 % Identity 14% Template c2zsmA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form Resolution 2.30 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		D	G	N	A	R	Q	N	L	A	T	F	C	Q	T	W	D	.	.	.	.	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	A	R	I	V	D	L	V	L	A	Y	G	P	L	I	L	G	H	K	H	P	R	V	L	E	A	V	E	E	A	L	A	R	G	W	L	Y	G	A	P	G	E	A	E	V	L	L	A	E	K	I	L	G	Y	V	K	R	G	G	M	.	.	.	.	.	.	.	.	.	.	I	R	F	V	N	S	G	T	E
Template Known Secondary structure		T							S	S	G	G	G	T	T		T	T		B	S													T	T		S			S	S			S															T	T			.	.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.											.	.	.	.	.	120	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.														.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template Sequence		A	T	M	T	A	I	R	L	A	R	G	Y	T	.	.	.	.	.	.	.	.	.	G	R	D	L	I	L	K	F	D	G	C	Y	H	G	S	H	D	A	V	L	V	A	A	G	G	V	P	T	S	A	G	V	P	E	A	V	A	R	L	T	L	V	T	P	Y	N	.	.	.	.	.	.	D	V	E	A	L	E
Template Known Secondary structure															.	.	.	.	.	.	.	.	.										T					S	S	G	G	G	S								S	S	T	T							T	T						T	T	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.
		196	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																					.	.	.	.
Query SS confidence						.	.	.																					.	.	.	.
Query Sequence		E	A	C	D	.	.	.	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K
Query Conservation						.	.	.																					.	.	.	.
Alig confidence						.	.	.																					.	.	.	.													.	.	.	.	.	.																											.	.	.
Template Conservation																																													.	.	.	.	.	.																											.	.	.
Template Sequence		R	V	F	A	E	Y	G	D	R	I	A	G	V	I	V	E	P	V	I	A	N	A	G	V	I	P	P	R	R	E	F	L	A	A	L	Q	R	L	S	R	E	S	G	.	.	.	.	.	.	A	L	L	I	L	D	E	V	V	T	G	F	R	L	G	L	E	G	A	Q	G	Y	F	N	I	E	.	.	.	G	D
Template Known Secondary structure								G	G	G								S	S	B		S	S	S		B																		T	.	.	.	.	.	.								T	T	T	T	T	T	S	S	T	T							T			.	.	.		S
Template Predicted Secondary structure																																													.	.	.	.	.	.																											.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.							.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q
Query Conservation
Alig confidence															.	.								.	.													.	.	.	.	.	.	.	.	.
Template Conservation															.	.								.	.													.	.	.	.	.	.	.	.	.
Template Sequence		I	I	V	L	G	K	I	I	G	G	G	F	P	.	.	V	G	A	V	A	G	S	.	.	R	E	V	M	S	L	L	T	P	Q	G	K	.	.	.	.	.	.	.	.	.	V	F	N	A	G	T	F	N	A	H	P	I	T	M	A	A	G	L	A	T	L	K	A	L	E	E	E	P	V	Y	S	V	S	R	E
Template Known Secondary structure							G	G	G	G	T	T	S	S	.	.								.	.					T	T	B	T	T	T	S	S	.	.	.	.	.	.	.	.	.	B					T	T	T	T																		S
Template Predicted Secondary structure															.	.								.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.										.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		349	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.								.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure														.																												.	.	.	.	.	.	.
Query SS confidence														.																												.	.	.	.	.	.	.
Query Sequence		V	A	A	Y	L	A	D	E	I	A	K	L	.	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	.	.	.	.	.	.	.	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V
Query Conservation														.																												.	.	.	.	.	.	.
Alig confidence														.																												.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		A	A	K	A	L	E	E	A	A	S	E	V	L	D	R	T	G	L	P	Y	T	I	N	R	V	E	S	M	M	Q	L	F	I	G	V	E	E	V	S	N	A	A	Q	A	R	K	A	D	K	K	F	Y	V	K	L	H	E	E	M	L	R	R	G	V	F	.	.	.	.	.	.	.	.	.	I	A	P	S	N	L
Template Known Secondary structure															T	T	S	S									T	T							T		S			S	S					T	T	S															T	T			.	.	.	.	.	.	.	.	.			S	S	T	T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.										.	.	400	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	V	F	T	G	L	P	H	Q	G	E	A	L	E	I	A	V	E	G	L	R	S	S	L	K	T	V	L	G	S
Template Known Secondary structure		S						T	T		S																				T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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